Gene
| Gene Model ID | pfu_aug2.0_2325.1_18771 |
|---|---|
| Locus | scaffold2325.1 : 95756 ... 113748 : + |
| To GenomeBrowser | scaffold2325.1:95756..113748 |
| Genes list of scaffold | scaffold2325.1 |
| Synonym | pfu_aug1.0_10315.1_17609 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2325.1_18771.t1 | 1 | 1 | Lectin_C | 16 | 124 | 5.7e-11 | 42.9 | 8.2e-15 | 1.2e-10 | 41.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2325.1_18771.t1 | gi|688574148|ref|XP_009303562.1| | PREDICTED: CD209 antigen-like protein B [Danio rerio] | 9.0e-07 |
| pfu_aug2.0_2325.1_18771.t1 | gi|658878017|ref|XP_008422009.1| | PREDICTED: macrophage mannose receptor 1-like [Poecilia reticulata] | 2.0e-06 |
| pfu_aug2.0_2325.1_18771.t1 | gi|742156016|ref|XP_010881866.1| | PREDICTED: ladderlectin-like [Esox lucius] | 3.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_2325.1_18771.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2325.1_18771.t1 atgaagaccagcgtcgaacagtgtgaattaaattacagttctgacaagaaatcttacgagcaggctgaacatgactgtca cttgaaaggaactaggcttgtcagaattgataccgattctaagtacgaaacggtcaaaaactttatgctacagcgaaatg ctgttgaagacgtatggataggtctccgatctgaaggacaagaatatgatgtatatcgtcattctgatggagcagtagca acattctttaaatgggacgccagcattcaagaacctaatgcgcaggacacagaccgatgtatccgtcttcatgctcaaac gctgatgtataggacatggaaatgtgacagagagtaccattatatttgtgaaagtagtgatgtatctacaactgctactc atgaaacactcaaaccctggtcagtagatgagtttgcaacgcaatctgatgaaaatggtttagaaagacaagacaccagt tcacctggaatgtcagcgggaaaattgggaacgactgcaatagaaaacagagattcagaaagacaagagagcagttcaat tgcaatgacatcagggaaattgggaacgtcttcacaagatggaaatgattcggaaagacagtttgactctacaacttcct ctcaagaaatgctcataccctggtcagggacatcaagaacgtctacactggtttctccatccagtggaaacataactgat gactgcgaagtctgtgaatgcaatatcttcttcggcagtatcagcgatccggctgtcctggaagctttaaaggagcgcat ccaagatattaagctgactctgtctttgaacaaatcagatctatcaaaacaagtacgaagaaaaataagtgcatcagatg aaagaatgtcttctacattactgggatgtgttggtgttgtttttcttgtgtttactattggtgtcattgtgattccagat accattaaactgatcaattatatgaaaggcaaaatttaa |
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Protein
| Protein ID | pfu_aug2.0_2325.1_18771.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2325.1_18771.t1 MKTSVEQCELNYSSDKKSYEQAEHDCHLKGTRLVRIDTDSKYETVKNFMLQRNAVEDVWIGLRSEGQEYDVYRHSDGAVA TFFKWDASIQEPNAQDTDRCIRLHAQTLMYRTWKCDREYHYICESSDVSTTATHETLKPWSVDEFATQSDENGLERQDTS SPGMSAGKLGTTAIENRDSERQESSSIAMTSGKLGTSSQDGNDSERQFDSTTSSQEMLIPWSGTSRTSTLVSPSSGNITD DCEVCECNIFFGSISDPAVLEALKERIQDIKLTLSLNKSDLSKQVRRKISASDERMSSTLLGCVGVVFLVFTIGVIVIPD TIKLINYMKGKI |
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