Gene
| Gene Model ID | pfu_aug2.0_2333.1_12118 |
|---|---|
| Locus | scaffold2333.1 : 17116 ... 47659 : + |
| To GenomeBrowser | scaffold2333.1:17116..47659 |
| Genes list of scaffold | scaffold2333.1 |
| Synonym | pfu_aug1.0_7549.1_60270 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2333.1_12118.t1 | 1 | 1 | PARG_cat | 205 | 539 | 0.0 | 431.8 | 0.0 | 0.0 | 430.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2333.1_12118.t1 | gi|573884683|ref|XP_006630422.1| | PREDICTED: poly(ADP-ribose) glycohydrolase-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_2333.1_12118.t1 | gi|585680076|ref|XP_006819631.1| | PREDICTED: poly(ADP-ribose) glycohydrolase-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_2333.1_12118.t1 | gi|583991925|ref|XP_006791139.1| | PREDICTED: poly(ADP-ribose) glycohydrolase-like [Neolamprologus brichardi] | 0.0 |
| pfu_aug2.0_2333.1_12118.t1 | gi|545194691|ref|XP_005602773.1| | PREDICTED: poly(ADP-ribose) glycohydrolase isoform X2 [Equus caballus] | 0.0 |
| pfu_aug2.0_2333.1_12118.t1 | gi|545194693|ref|XP_005602774.1| | PREDICTED: poly(ADP-ribose) glycohydrolase isoform X3 [Equus caballus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2333.1_12118.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2333.1_12118.t1 atgacttcagtagcagatgaagattcaacctccaagggggcatccttgaataaagcacaggcacctgttaataccagaac aaaaaaccataagcaagaagtattaaaggttgagacagtacatgagaatgaacttaccaaagatgatggtgtcacagagt caaccagccttaacaagacttcagataaagctttagataataactttgaaggtttgaatttatgttctgatatgacagat tctcaggagtctgtcccagatatccctgagagaaaaccaagtcaacggcagagtgactgtatatggaggggcgtatcatt acctgaactgaatagaaagccagattgtatgaagcccttaccaccattaaaggtcgatgatagacattgtgttctataca aaacaaattttaagtacaatggtaaacattatcctatcccacatcccacacagtataaagacgtatgggaccaagatcac gtacgaatgccgtgttctcacatgaatgagtaccctgtcaaagacaaagatgggaaatcggtcgtgaagagacgctgggc aatcatagagcaggcattgaagggcaacattccaggaccatttgaactagaggaggtaagcagagatgagagaatacatt tctttgatgtaacactgaagaagattgtaaatctggctctgatgttaccacatctcattactcagcccatcccccttctg aagaagaatagaaatcagagtctaagtctcagccagcagcagattgcgtctctactcgctaatgccttcttttgtacttt tccaagacgtaatgccaaacaacgcagttcagagttcagtaattatccaactattaactttaacagtttatatgaaggat atccagtgcaaaagaagttggaaaaactgaagtgtttaattcattatttccgacgtgtaacaacaaatatgcctaaagga acagtcacatttgagaggcagtgtgtaccaaatgataaatttcctgattggaaaaacctggacacaaagcttacaaagtt acatgtatctgcagagggaacaatagaggatgatggggaaggcatgttacaggttgattttgccaacaagattctgggag gaggtgtattaggccagggatgtgtccaggaggaaatcaggttccttatctgtccagagatgttagttactaggctgttt acagaatgcttagagaaaaacgaaagtttaattatgtatggctgtgagagattcagcaagtatgatggctatgcacagac atttaaatgggatggcaattttgacgataaaactctaagagatgagtggggccgtttatgtacagacgtggttgccattg atgcattggtgattagagagtttggcagacaatttaaaatggatcaaatcagacgagaacttaataaggcatattgtgga tttttatcccatggtatgaaggcagagaatctgagtgcagtatgtacagggaactggggatgtggggcgttcggaggcga caagagactaaaagctttgatccagttgatagcagcttcatatgctaaaagggatgtatgttacctgacctttgatgata agactttacgtgatgagcttgcggaagtccatcaataccttacaaagactaatcccctaggaataggcaatatactgact ttaatacagcaatatgagaaaaatgttgtcagcaggaagcctaagaaatccaagtattcagtaaacctgtatcaatacat ccctcgtgtgtttgacggtacgttagagatgacggacagtgagcccgacacgcctacctgggacgactcggacagtaatg aaactcgatacatgcttgctgcacaggacagtgtagaggcagaaaatactgctgacgatactaaaaatgaagtaaaaaag aatgatggcaataaaaccactgaacgaccaaagtctggagaaaagcctgccgttcaacgacaagagtcaaaagactataa agctgatactccctga |
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Protein
| Protein ID | pfu_aug2.0_2333.1_12118.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2333.1_12118.t1 MTSVADEDSTSKGASLNKAQAPVNTRTKNHKQEVLKVETVHENELTKDDGVTESTSLNKTSDKALDNNFEGLNLCSDMTD SQESVPDIPERKPSQRQSDCIWRGVSLPELNRKPDCMKPLPPLKVDDRHCVLYKTNFKYNGKHYPIPHPTQYKDVWDQDH VRMPCSHMNEYPVKDKDGKSVVKRRWAIIEQALKGNIPGPFELEEVSRDERIHFFDVTLKKIVNLALMLPHLITQPIPLL KKNRNQSLSLSQQQIASLLANAFFCTFPRRNAKQRSSEFSNYPTINFNSLYEGYPVQKKLEKLKCLIHYFRRVTTNMPKG TVTFERQCVPNDKFPDWKNLDTKLTKLHVSAEGTIEDDGEGMLQVDFANKILGGGVLGQGCVQEEIRFLICPEMLVTRLF TECLEKNESLIMYGCERFSKYDGYAQTFKWDGNFDDKTLRDEWGRLCTDVVAIDALVIREFGRQFKMDQIRRELNKAYCG FLSHGMKAENLSAVCTGNWGCGAFGGDKRLKALIQLIAASYAKRDVCYLTFDDKTLRDELAEVHQYLTKTNPLGIGNILT LIQQYEKNVVSRKPKKSKYSVNLYQYIPRVFDGTLEMTDSEPDTPTWDDSDSNETRYMLAAQDSVEAENTADDTKNEVKK NDGNKTTERPKSGEKPAVQRQESKDYKADTP |
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