Gene
| Gene Model ID | pfu_aug2.0_2333.1_12119 |
|---|---|
| Locus | scaffold2333.1 : 50474 ... 68345 : - |
| To GenomeBrowser | scaffold2333.1:50474..68345 |
| Genes list of scaffold | scaffold2333.1 |
| Synonym | pfu_aug1.0_7549.1_60271 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2333.1_12119.t1 | 2 | 1 | Tweety | 23 | 285 | 2.29813e-43 | 148.1 | 7.00649e-45 | 9.99967e-42 | 142.7 |
| pfu_aug2.0_2333.1_12119.t1 | 2 | 2 | Tweety | 290 | 332 | 2.29813e-43 | 148.1 | 0.01 | 15.0 | 3.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2333.1_12119.t1 | gi|524879935|ref|XP_005096637.1| | PREDICTED: protein tweety homolog 2-like [Aplysia californica] | 6.0e-36 |
| pfu_aug2.0_2333.1_12119.t1 | gi|390338757|ref|XP_790709.3| | PREDICTED: protein tweety homolog 1-B isoform X4 [Strongylocentrotus purpuratus] | 2.0e-30 |
| pfu_aug2.0_2333.1_12119.t1 | gi|597740946|ref|XP_007232620.1| | PREDICTED: protein tweety homolog 2-like [Astyanax mexicanus] | 2.0e-29 |
| pfu_aug2.0_2333.1_12119.t1 | gi|585650919|ref|XP_006814662.1| | PREDICTED: protein tweety homolog 3-like isoform X2 [Saccoglossus kowalevskii] | 4.0e-29 |
| pfu_aug2.0_2333.1_12119.t1 | gi|291226583|ref|XP_002733275.1| | PREDICTED: protein tweety homolog 3-like isoform X1 [Saccoglossus kowalevskii] | 4.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_2333.1_12119.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2333.1_12119.t1 atggcgaatactgaaaagttctggtttattactcttcttcacgattttcctcatatcaacttttcttttgaaaagactaa cgcgacattcgatccatccagtagtagttacagagagtctatagtattcctgagtgccttacctgtcatcttcatacttt tgatcatcattctctcagcatgctgtctctgtgcactgtgtgtgaagaaacaaccacaaaaagccgtcaaaaccacatgt ctacgaatatttgcagctatttttattatcttcacaataggatcagcagcagttggattctttgcaaatcaacatacaaa ttctggagttaatagctttgtcaattctgtcaatgatgccaaccaatcactggaggatacatacagtactcttaacatcc ttaaccaaacagccgtgcgtatacaatcaaagggtgtcaatggtatactgaacgtaattagatctagaatacaaaacaca acagccgtaaacttactagaaaatctcatggagaaaatagagcaggattctgattctacacggaaaatactgaaagagat aaaagacaaagtgcctcgtactgatctcactaatgtctccacaagaaccaaagagatagaattctatagatggtgcggta ccatagtgcttctgtgctttgtcctcttccttatgatcttagctatagttggctgttataaaaaatccagatgttttctc ctgatggccacttgtataggatatttagtgttattgttagtatggatagctagtggagtttatctaggaacagctgtggc tggaggtgacctttgtgacaatcctgatggatttatagaatctcttggcagcaatagtgcacagaaaatattattactat tagtggttccgtttatgggactttgtatggtgttcattcagtgtctactaccaaggatctggcatctaagtgctaaaaga cgtggttatcgtcctgttgacgacacagacccgttcagtccacgtcctccaccgtataacggctatggcagcatgcatgc aggacgcacgtctaacgctgattactatggagaacccagacatagtataaatgattcacatagtgtagatgtactaacac acgagctgcctagaaacgagtccccaccaccggccgtaagtatgagttacttccccttatcctcacagtttgtctccctt tttcagcacagctatagatcatggcagcttggagaccctccctatgagaggccccctttctga |
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Protein
| Protein ID | pfu_aug2.0_2333.1_12119.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2333.1_12119.t1 MANTEKFWFITLLHDFPHINFSFEKTNATFDPSSSSYRESIVFLSALPVIFILLIIILSACCLCALCVKKQPQKAVKTTC LRIFAAIFIIFTIGSAAVGFFANQHTNSGVNSFVNSVNDANQSLEDTYSTLNILNQTAVRIQSKGVNGILNVIRSRIQNT TAVNLLENLMEKIEQDSDSTRKILKEIKDKVPRTDLTNVSTRTKEIEFYRWCGTIVLLCFVLFLMILAIVGCYKKSRCFL LMATCIGYLVLLLVWIASGVYLGTAVAGGDLCDNPDGFIESLGSNSAQKILLLLVVPFMGLCMVFIQCLLPRIWHLSAKR RGYRPVDDTDPFSPRPPPYNGYGSMHAGRTSNADYYGEPRHSINDSHSVDVLTHELPRNESPPPAVSMSYFPLSSQFVSL FQHSYRSWQLGDPPYERPPF |
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