Gene
| Gene Model ID | pfu_aug2.0_2333.1_12121 |
|---|---|
| Locus | scaffold2333.1 : 94342 ... 101565 : - |
| To GenomeBrowser | scaffold2333.1:94342..101565 |
| Genes list of scaffold | scaffold2333.1 |
| Synonym | pfu_aug1.0_44052.1_19905 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fanconi anemia-associated protein of 24 kda isoform x1 | GO:0043231 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2333.1_12121.t1 | 1 | 1 | HHH_2 | 99 | 146 | 8.3e-07 | 28.8 | 3.2e-10 | 1.6e-06 | 27.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2333.1_12121.t1 | gi|390347125|ref|XP_798494.3| | 9.99995e-41 | |
| pfu_aug2.0_2333.1_12121.t1 | gi|291223953|ref|XP_002731972.1| | PREDICTED: Fanconi anemia-associated protein of 24 kDa-like [Saccoglossus kowalevskii] | 8.99999e-40 |
| pfu_aug2.0_2333.1_12121.t1 | gi|676482572|ref|XP_009062746.1| | hypothetical protein LOTGIDRAFT_220534 [Lottia gigantea] | 2.0e-39 |
| pfu_aug2.0_2333.1_12121.t1 | gi|558124796|ref|XP_006114981.1| | PREDICTED: Fanconi anemia-associated protein of 24 kDa isoform X1 [Pelodiscus sinensis] | 1.0e-37 |
| pfu_aug2.0_2333.1_12121.t1 | gi|557262321|ref|XP_006016688.1| | PREDICTED: Fanconi anemia-associated protein of 24 kDa [Alligator sinensis] | 6.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_2333.1_12121.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2333.1_12121.t1 atggtgactgctactggatatcgcaggaaactagccaagcttagaaaggcaaacaaaataaatgttttggttctatttga gaagacccccacaagcacacagtactttccagcagcacagaaattttgtgctttagagcttggtttctctatgcttcctg tgcctggacagaaacaagctggtacaatattagcaagtatggttcataatgaaagcagactagattccaacccatactgt aagaagaggaaggccacatcactggacaaagccatgctggatactgtacaggctatcccaaaacttggacagatcaaggc cagagcattgctggaaaacttccaaagtatccatggaatctgtcaagcaagtatagaggagctgtccttggtggtaggaa gagctagtgctaatcaggtgaaagctttctttgggaatggctaa |
|
Protein
| Protein ID | pfu_aug2.0_2333.1_12121.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2333.1_12121.t1 MVTATGYRRKLAKLRKANKINVLVLFEKTPTSTQYFPAAQKFCALELGFSMLPVPGQKQAGTILASMVHNESRLDSNPYC KKRKATSLDKAMLDTVQAIPKLGQIKARALLENFQSIHGICQASIEELSLVVGRASANQVKAFFGNG |
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