Gene
| Gene Model ID | pfu_aug2.0_2334.1_15485 |
|---|---|
| Locus | scaffold2334.1 : 25091 ... 30895 : - |
| To GenomeBrowser | scaffold2334.1:25091..30895 |
| Genes list of scaffold | scaffold2334.1 |
| Synonym | pfu_aug1.0_24564.1_33444 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2334.1_15485.t1 | 2 | 1 | AA_permease | 145 | 292 | 9.5e-06 | 24.2 | 1.3e-09 | 9.5e-06 | 24.2 |
| pfu_aug2.0_2334.1_15485.t1 | 2 | 1 | AA_permease_2 | 150 | 292 | 7.7e-25 | 87.2 | 1.3e-22 | 9.4e-19 | 67.2 |
| pfu_aug2.0_2334.1_15485.t1 | 2 | 2 | AA_permease_2 | 292 | 408 | 7.7e-25 | 87.2 | 3.5e-09 | 2.6e-05 | 22.9 |
| pfu_aug2.0_2334.1_15485.t1 | 2 | 2 | AA_permease | 296 | 372 | 9.5e-06 | 24.2 | 0.00036 | 2.7 | 6.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2334.1_15485.t1 | gi|557328213|ref|XP_006037039.1| | PREDICTED: cystine/glutamate transporter-like [Alligator sinensis] | 7.0e-36 |
| pfu_aug2.0_2334.1_15485.t1 | gi|327273918|ref|XP_003221726.1| | PREDICTED: cystine/glutamate transporter [Anolis carolinensis] | 1.0e-34 |
| pfu_aug2.0_2334.1_15485.t1 | gi|676478389|ref|XP_009061411.1| | hypothetical protein LOTGIDRAFT_179200 [Lottia gigantea] | 1.0e-34 |
| pfu_aug2.0_2334.1_15485.t1 | gi|195018478|ref|XP_001984788.1| | GH16664 [Drosophila grimshawi] | 2.0e-34 |
| pfu_aug2.0_2334.1_15485.t1 | gi|676494654|ref|XP_009066631.1| | hypothetical protein LOTGIDRAFT_109029 [Lottia gigantea] | 5.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_2334.1_15485.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2334.1_15485.t1 atgcgtttacaaataaatagacgatgtgttgattacctcagcagtatctatccctcggagcttgaagtcaaagaaactac agagacaaataatttagtatcctatttggacataatgttgtcctacgacactgatggtcacatgaacacctcactctatg acaaccgtgacgactccaatttcagcattacaaactttccttgtctgagtagcaacatccctacatcgcctgcttatggc gtgttcatatctcagttgatacgctatgccagagcaagaaccaaatatacggatattgttctgagagctaggcggctgtc agataagcttctcagtcagggatatgtttgtgaccgacaagcatcgtcactgagaaaattctacggtcgatatggggaac tcgtcatacacactgatgtcccactctccagaatgggagtgtacgagggagctggatctgtggggctatgtttaatcatt tggacaatttgtggattaatcggaataggaggagcttttgtatatgccgatcttggtctgatgatacctaggtctggcgg tgactatacgtacttatcaagagcaacgggaaacttcacggcatttatgtacatatgggttcaaatattggtgatttacc ctatggctaacgttatattgtccatgactgttggtgaatatctaaccgccttattcattaatgacgattgtggtccaagg gaaataatcaaacgattgattgccgctgctgttataacttcttttgcaattttgaacattgcaagtgtcaacattgttgc aaagctttcggtttttctgacgtctgtaaaggtcggagccctgatgtttatcattgttgccggtttagcacatgcagcca ttcaagcttcttttgcaattttgaacattgcaagtgtcaacattgttgcaaagctttcggtttttctgacgtctgtaaag gtcggagccctgatgtttatcattgttgccggtttagcacatgcagccattcaaggtaattatggaaaccttggagaagg atttcgaggtacaacaacggaagtatctggaatagccgctgctttttacagtgcattttgggcaacaagtggatggactc tgccaatatcaatcactgtgtctgtggtcatagtcctgttattgtgtgttctcgtaaatgtttcgtattttgtagccctc tcaaaggatgaatttctctcttcctgggctgtcgcaatggactctgccaatatcaatcactgtgtctgtggtcatagtcc tgttattgtgtgttctcgtaaatgtttcgtattttgtagtcctctcaaaggatga |
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Protein
| Protein ID | pfu_aug2.0_2334.1_15485.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2334.1_15485.t1 MRLQINRRCVDYLSSIYPSELEVKETTETNNLVSYLDIMLSYDTDGHMNTSLYDNRDDSNFSITNFPCLSSNIPTSPAYG VFISQLIRYARARTKYTDIVLRARRLSDKLLSQGYVCDRQASSLRKFYGRYGELVIHTDVPLSRMGVYEGAGSVGLCLII WTICGLIGIGGAFVYADLGLMIPRSGGDYTYLSRATGNFTAFMYIWVQILVIYPMANVILSMTVGEYLTALFINDDCGPR EIIKRLIAAAVITSFAILNIASVNIVAKLSVFLTSVKVGALMFIIVAGLAHAAIQASFAILNIASVNIVAKLSVFLTSVK VGALMFIIVAGLAHAAIQGNYGNLGEGFRGTTTEVSGIAAAFYSAFWATSGWTLPISITVSVVIVLLLCVLVNVSYFVAL SKDEFLSSWAVAMDSANINHCVCGHSPVIVCSRKCFVFCSPLKG |
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