Gene
| Gene Model ID | pfu_aug2.0_2334.1_15486 |
|---|---|
| Locus | scaffold2334.1 : 38662 ... 52295 : - |
| To GenomeBrowser | scaffold2334.1:38662..52295 |
| Genes list of scaffold | scaffold2334.1 |
| Synonym | pfu_aug1.0_5167.1_52470 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2334.1_15486.t1 | 1 | 1 | AA_permease_2 | 14 | 431 | 0.0 | 178.9 | 0.0 | 0.0 | 178.5 |
| pfu_aug2.0_2334.1_15486.t1 | 1 | 1 | AA_permease | 21 | 398 | 4.3e-29 | 101.1 | 7.9e-33 | 5.8e-29 | 100.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2334.1_15486.t1 | gi|676478507|ref|XP_009061450.1| | hypothetical protein LOTGIDRAFT_234854 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2334.1_15486.t1 | gi|348500198|ref|XP_003437660.1| | PREDICTED: B(0,+)-type amino acid transporter 1 isoform X1 [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_2334.1_15486.t1 | gi|676435137|ref|XP_009047459.1| | hypothetical protein LOTGIDRAFT_225086 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2334.1_15486.t1 | gi|118404962|ref|NP_001072500.1| | B(0,+)-type amino acid transporter 1 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_2334.1_15486.t1 | gi|676469164|ref|XP_009058443.1| | hypothetical protein LOTGIDRAFT_122747, partial [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2334.1_15486.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2334.1_15486.t1 atgacgtcatcagataaaacgttcagcgtcaaacagagaatcggcgttctaactggtatatcattcattgtgggaaatat cataggctcaggaattttcatatcacccaagggagtttatgcaggcactggttctgtcggattctgtttaataatttgga cggtttgcggttttattgcaatagcaggtgctttcgtatatgctgatcttggtctgatgatacagaggtccggtggggac tatgtttatatatcaagagccacggggaagtttttggcgtttatgttcatctgggtacagatactggtcgtgtaccccat gtctcacgtgatcaagtccctgacggtgggggaatacctcactgcattagttatagacggagaatgtggaccaagggaaa tcatcaaaagattaattgctgctgtcgtcatagtcacgctgaccatgttaaatgttgccagtgtccatgctgtggccaag agtcagattttcttgatggttataaaaattggagcactgatttttatcgtgctgggcggctttatacactctgccataca aggtagtgtagggaacttaggagagggatttgagggaactacgacagagatatcgggtgtggcggctgccatgtacagtg gaatatgggcctataacggctggatgaacttgaattatagcatggaagaagtatacaaaccaagaagaaccttaccacta gccatctctatatccgtggtcatggttcttattctttacgtccttgtcaacgtctcatacttcgcagttcttagcagaga tgagttcctttcctcgtgggcagtaggagtgacttgggaggaaaaagtaatcggagccaactcatttctgatcacccttg tggtggctctgtctgtatttggttctggacagggagctgcgttttcctctgcaaggttatcctatgcagctgcaagaggt gacactttccctgagatcttgtcatacattcatgttcgcagcagaataccaacggcctctgtactactcgtgtcagcact tgcaatggtgtaccttgcccttcccggaagcgttggtgacattatcaacgttagcggattcattggagcagcattccaga gtttagtgtttataagccacatcattctctcgtacaaaatgagaaaaatcgaacgtccgataaaagtacctgtgatattt tctggcttaatggctttagtattcgcatatttgttcgttgcacctttaattggagggaagtttcaagattacatattcgc cgtagcttttctgggagcaggagtgataatgtatttcccctttgtacatttcaaattacgccttccattaacagatgtag tggttggtttcattcagttagtattagatatcgctccgccagacaaatacatggatcaggagaatgaaaacagtgagcct aaaggtcaagacaatatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nngggttttaa |
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Protein
| Protein ID | pfu_aug2.0_2334.1_15486.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2334.1_15486.t1 MTSSDKTFSVKQRIGVLTGISFIVGNIIGSGIFISPKGVYAGTGSVGFCLIIWTVCGFIAIAGAFVYADLGLMIQRSGGD YVYISRATGKFLAFMFIWVQILVVYPMSHVIKSLTVGEYLTALVIDGECGPREIIKRLIAAVVIVTLTMLNVASVHAVAK SQIFLMVIKIGALIFIVLGGFIHSAIQGSVGNLGEGFEGTTTEISGVAAAMYSGIWAYNGWMNLNYSMEEVYKPRRTLPL AISISVVMVLILYVLVNVSYFAVLSRDEFLSSWAVGVTWEEKVIGANSFLITLVVALSVFGSGQGAAFSSARLSYAAARG DTFPEILSYIHVRSRIPTASVLLVSALAMVYLALPGSVGDIINVSGFIGAAFQSLVFISHIILSYKMRKIERPIKVPVIF SGLMALVFAYLFVAPLIGGKFQDYIFAVAFLGAGVIMYFPFVHFKLRLPLTDVVVGFIQLVLDIAPPDKYMDQENENSEP KGQDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGF |
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