Gene
| Gene Model ID | pfu_aug2.0_2334.1_15487 |
|---|---|
| Locus | scaffold2334.1 : 55773 ... 70255 : - |
| To GenomeBrowser | scaffold2334.1:55773..70255 |
| Genes list of scaffold | scaffold2334.1 |
| Synonym | pfu_aug1.0_5167.1_52471 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2334.1_15487.t1 | 1 | 1 | AA_permease_2 | 16 | 436 | 0.0 | 175.0 | 0.0 | 0.0 | 174.7 |
| pfu_aug2.0_2334.1_15487.t1 | 1 | 1 | AA_permease | 22 | 413 | 3.7e-18 | 65.1 | 7.3e-22 | 5.4e-18 | 64.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2334.1_15487.t1 | gi|390347953|ref|XP_784756.3| | PREDICTED: b(0,+)-type amino acid transporter 1 isoform X1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_2334.1_15487.t1 | gi|675858990|ref|XP_009015055.1| | hypothetical protein HELRODRAFT_110971 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_2334.1_15487.t1 | gi|260834813|ref|XP_002612404.1| | hypothetical protein BRAFLDRAFT_58624 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2334.1_15487.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2334.1_15487.t1 atggaatcaccagagattacgtcaacgtttacggtgaagcggaggttaggggttaccagcgctgtagcctttcttatcag cagtatgattggttcaggtatattcatttctccaacaggggtgtaccgtaatacacagtccgtcggtctgtgtctgctga tatggaccatttgtggactaactgccttagccggtgcccttgtgtatgctgagttaggactactagtaccaaagacaggt ggagactatagttactataagaggacatttggtaacttccctgcgttctggtacgtgtggtcccaatgcctggtggtcta tccagtgtcaaatgtcatcaagtcactgaccatagcagaatacgccgctggagccgtctttgatgaatgcggtccaccag aattattaaaacggctgtttgcaataacactcattgtgacatttaccattatcaatgtagttaatgtagatctagcagct cgaacccaggttctctttgccacggtaaaaattggtggtctggctgtcatagcaggaagcggactgtacgtcattagtaa aggtaaatttggtacccttaccacaggattcagcgggtccacatcagatttgtcagacgttgtggctgccatgtacagtg gtatctgggcgttctctgggtggaaaactatcaattttagtatagaggaggtcattcaccctaaaaggactttgccttta tccattgtgatatcgatggtaaccgtactggtcctatacgtaatggtgaacatatcttactttgtggtcttgacaccaca agagttcatgtcatcctgggctgttggaataacatggggagacaaaatcttagggagaggagcactatttgtccccatcg tggtggcatgctcggtgtttggatcggcgtgtgaagcttcattctcatcggcaagaataatatttgctggagctagagat ggtaacttcgtagagttcttttccttcattgacgtgaaatccagaatacctacaccctccatttttcttgtttccgtcct gtcgttggcgtatctactcttaccgttaaaggtaggggagataatcaacatgatggggttcctcactgcaggattcaatg ccttaacgatggtgtgtcacatagtcctacggtttaatattaaggatgcttcagttccgtttagggtaccaatattagta tcctttctactgtctgtgatatatatttaccttttcattgcaccactgctaaatggtgtgaaaaaagagatcatctttcc tgtagtattcatgtcccttggtgcagttctgtacataccatttatactactgcagtttaaactgcctggtttagaatact ccgtaggtttcttccagctactattgcaagttgcccccgttgctgttgacccaagccatttacaatatcgcgataatcgt tattctgagaaatccgcatgctgtcagtctcatagagttttaatccggtgcttgggaagcggagactag |
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Protein
| Protein ID | pfu_aug2.0_2334.1_15487.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2334.1_15487.t1 MESPEITSTFTVKRRLGVTSAVAFLISSMIGSGIFISPTGVYRNTQSVGLCLLIWTICGLTALAGALVYAELGLLVPKTG GDYSYYKRTFGNFPAFWYVWSQCLVVYPVSNVIKSLTIAEYAAGAVFDECGPPELLKRLFAITLIVTFTIINVVNVDLAA RTQVLFATVKIGGLAVIAGSGLYVISKGKFGTLTTGFSGSTSDLSDVVAAMYSGIWAFSGWKTINFSIEEVIHPKRTLPL SIVISMVTVLVLYVMVNISYFVVLTPQEFMSSWAVGITWGDKILGRGALFVPIVVACSVFGSACEASFSSARIIFAGARD GNFVEFFSFIDVKSRIPTPSIFLVSVLSLAYLLLPLKVGEIINMMGFLTAGFNALTMVCHIVLRFNIKDASVPFRVPILV SFLLSVIYIYLFIAPLLNGVKKEIIFPVVFMSLGAVLYIPFILLQFKLPGLEYSVGFFQLLLQVAPVAVDPSHLQYRDNR YSEKSACCQSHRVLIRCLGSGD |
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