Gene
| Gene Model ID | pfu_aug2.0_2335.1_18776 |
|---|---|
| Locus | scaffold2335.1 : 61826 ... 92691 : + |
| To GenomeBrowser | scaffold2335.1:61826..92691 |
| Genes list of scaffold | scaffold2335.1 |
| Synonym | pfu_aug1.0_737.1_58229 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| solute carrier family 13 member 2 | GO:0046942 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2335.1_18776.t1 | 6 | 1 | Na_sulph_symp | 31 | 200 | 0.0 | 356.2 | 2.0e-25 | 9.9e-22 | 77.4 |
| pfu_aug2.0_2335.1_18776.t1 | 7 | 1 | CitMHS | 61 | 103 | 8.1e-13 | 47.6 | 0.00019 | 0.96 | 7.9 |
| pfu_aug2.0_2335.1_18776.t1 | 7 | 2 | CitMHS | 177 | 199 | 8.1e-13 | 47.6 | 0.13 | 660.0 | -1.4 |
| pfu_aug2.0_2335.1_18776.t1 | 6 | 2 | Na_sulph_symp | 283 | 304 | 0.0 | 356.2 | 0.038 | 190.0 | 0.6 |
| pfu_aug2.0_2335.1_18776.t1 | 6 | 3 | Na_sulph_symp | 320 | 361 | 0.0 | 356.2 | 1.7e-07 | 0.00086 | 18.2 |
| pfu_aug2.0_2335.1_18776.t1 | 6 | 4 | Na_sulph_symp | 365 | 415 | 0.0 | 356.2 | 2.1e-05 | 0.11 | 11.3 |
| pfu_aug2.0_2335.1_18776.t1 | 7 | 3 | CitMHS | 415 | 494 | 8.1e-13 | 47.6 | 7.4e-06 | 0.037 | 12.6 |
| pfu_aug2.0_2335.1_18776.t1 | 6 | 5 | Na_sulph_symp | 416 | 494 | 0.0 | 356.2 | 9.0e-10 | 4.4e-06 | 25.8 |
| pfu_aug2.0_2335.1_18776.t1 | 6 | 6 | Na_sulph_symp | 517 | 1006 | 0.0 | 356.2 | 0.0 | 0.0 | 222.9 |
| pfu_aug2.0_2335.1_18776.t1 | 7 | 4 | CitMHS | 607 | 644 | 8.1e-13 | 47.6 | 0.0015 | 7.2 | 5.0 |
| pfu_aug2.0_2335.1_18776.t1 | 7 | 5 | CitMHS | 728 | 832 | 8.1e-13 | 47.6 | 2.1e-06 | 0.011 | 14.3 |
| pfu_aug2.0_2335.1_18776.t1 | 7 | 6 | CitMHS | 922 | 1006 | 8.1e-13 | 47.6 | 4.5e-08 | 0.00022 | 19.9 |
| pfu_aug2.0_2335.1_18776.t1 | 7 | 7 | CitMHS | 1028 | 1047 | 8.1e-13 | 47.6 | 0.6 | 3000.0 | -3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2335.1_18776.t1 | gi|513216838|ref|XP_004946864.1| | PREDICTED: solute carrier family 13 member 5 isoform X5 [Gallus gallus] | 0.0 |
| pfu_aug2.0_2335.1_18776.t1 | gi|704510744|ref|XP_010080465.1| | PREDICTED: solute carrier family 13 member 2 [Pterocles gutturalis] | 0.0 |
| pfu_aug2.0_2335.1_18776.t1 | gi|513215822|ref|XP_425404.3| | PREDICTED: solute carrier family 13 member 2 isoform 2 [Gallus gallus] | 0.0 |
| pfu_aug2.0_2335.1_18776.t1 | gi|291226645|ref|XP_002733305.1| | PREDICTED: solute carrier family 13 member 3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_2335.1_18776.t1 | gi|698403102|ref|XP_009707310.1| | PREDICTED: solute carrier family 13 member 2 [Cariama cristata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2335.1_18776.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2335.1_18776.t1 atgatcgatgcaatagataagagacattataggaagctgattgtaatatgtacccctatacttgtgttgccattaccagc ttcacttggttcccaggatataaactttgttttcatcggaggattaggggttgctgtagcagtagagaagtggaaaatac atcgtcggtttgctttaagattattgttactcatgggatcagagcctaaatggttgatgcttgggtttatgttgataacg tcatttttatctatgtggatgagtaacacagcaaccacgtctatgatgatacctatagcacaagctgttcttgttcagct tctcaaaaccaaggaacttcaaacatcaccgaataaatgtaaaggagaatacacaaacgaacttgttttgaagacggatc atcacgaaagcgcaaaactgtcacttctcaacagtgaagagaaagtcagaacaacaaattcaagagataaagaagatgtc tttgatttccaatccctatccgatgatgataagaagctgtgtaaggccttctgtctcagtatatgctacgctgctaactg tggtggcgtagctacgttaacgggaacctgtacaaatctgcacaaaatcgataacccagaaaatcagaaaccgaagacat acaaaatcaggataaaacaggaaccaaagcaaacaaacaaaaacctccaccatatgaaaagaagcgaactcccagttatg cttctgtggtcatcaggggacaggacagtatggtcatactactatacccttttaagatatctgcagtacctaatgttgag atctgatgcaggaaagctgctatgtgccaataaagataagcatgattcgtcaggtgttcaggatgtgattcagaaagaat atgacaaacttggacctttaaaggacaaaaaaacacctagcttcacctttgtcacaattctagataaatcggctgaggaa attccgccccttatggattggaaaacattgaatgccaagttaccttggggtgtttgtattctcctcggagggggattcgc cttggcccgggcgtgtacgggatatggtcaatatccatatttgtcatgtataacattgaatgccaagttaccgcgggatg tgtgtattctcctcggagggggattcgccttggccagggcgtgcacggattcccggttatccttctggctagcagatcag atgtcggttttcagtaccatcccaccgtgggctatgattttcgtcatacatgattccgggttatcctactggctagcaga tcagatgtcggttttcagtaccatcccaccgtgggctatgatattcgtcatatgtcttattgtctcattctctactgaag tcaccagtaacaccgctatatgtactatattcatgcccattctagcagagttggctaaagttggcttcctgatcaacatt ttgtgtgtcattgttgttacgctggccattaattcatacggtataccgtactttggtctgaacaacaagatgtcaatttc tttgtttcttaggagacattatagaaagttgattgtaatatgtacccctatacttttgttaccactacctatctcactac gctcgcaggttggaaattgtgcatatggattgatattgatggctgtattttggattacggaggcgttaccacttcctgtg accgctttactaccaatcgtgatatttcccattcttggagttagtaaagtcaaaattttggctcatctctatttcaatat tatgataataccgattgtggactccttttcgtcttcacttaatgcgtnaaaaaatatgcattcaagtataaacaagttga tgcttgggtttatgttgataacgtcctttttatctatgtggatgagtaacacagctaccacgtctatgatgatacctata gcacaggctgttcttgttcaacttctcaaaaccaaggaacttcaaacagtcccagatgaagcgagagcaacgaaagagct tattgtgaaagttgatgtacatgacaacagagaaccaaaacttctcaaagaagaagacaaaatgaggcagaataaaataa tttgttttgattctgtcatcagtgaagcccgttcaggagaaaaagaagatgtctttgatttccactccctgtccgatgct aataagaagttatgcaaggccttttgtctcagtatctgctacgctgctaactgtggtggcgtagctacgttgacgggaac tggacctaatctggtaatgaaaggccaagctgactttttagcagatggtgaatctggcatcacgttcgcgacatggtttg tgtttggtttacctgtggccttcgttaactgtttgatatgttggtttgtagtgcagatctccttctttggattcagaaag cttctgtgtgctaacaaagataaagataattcttcaggagttcagaaagtgatacaagtggaatatgacaaactaggaca aatgaattttgcagaaaaggctgtgattggtcacttcatcttactagtacttttatggttcacactggaacccgaatttg ttccagggtgggggtcactgttcaggaaaggttatgtcaaagattccgttcccgccatcttcatcgttctcagtttattc gttttcccgagcagacgacgagaaaaatccgacaaatcggcagatgaaattccgccccttatggattggaaaacattgaa tgccaagttaccgtggggtgtttgtattctcctaggagggggattcgccttggccagggcgtgcacggattctggattat catactggctggcagatcagatgtcggtgttcagtaccatcccaccgtgggctatgatatttgttatatgtctaatcgtc tcattctctactgaagtcacaagtaacaccgctatatgtactatcttcatgcccattctagcagagttggctaaagttgg attcctgattaatatcctatgtgtaattgttgttacattggccattaacacatacggtataccatattttggcctggaca cgtatccagaatgggccaagcgacacagtgatgccagacatacaacggtgatatctaactacacaagtgacattagcaac ggcacaatgatgtcgaatagtacatataacatgatatag |
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Protein
| Protein ID | pfu_aug2.0_2335.1_18776.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2335.1_18776.t1 MIDAIDKRHYRKLIVICTPILVLPLPASLGSQDINFVFIGGLGVAVAVEKWKIHRRFALRLLLLMGSEPKWLMLGFMLIT SFLSMWMSNTATTSMMIPIAQAVLVQLLKTKELQTSPNKCKGEYTNELVLKTDHHESAKLSLLNSEEKVRTTNSRDKEDV FDFQSLSDDDKKLCKAFCLSICYAANCGGVATLTGTCTNLHKIDNPENQKPKTYKIRIKQEPKQTNKNLHHMKRSELPVM LLWSSGDRTVWSYYYTLLRYLQYLMLRSDAGKLLCANKDKHDSSGVQDVIQKEYDKLGPLKDKKTPSFTFVTILDKSAEE IPPLMDWKTLNAKLPWGVCILLGGGFALARACTGYGQYPYLSCITLNAKLPRDVCILLGGGFALARACTDSRLSFWLADQ MSVFSTIPPWAMIFVIHDSGLSYWLADQMSVFSTIPPWAMIFVICLIVSFSTEVTSNTAICTIFMPILAELAKVGFLINI LCVIVVTLAINSYGIPYFGLNNKMSISLFLRRHYRKLIVICTPILLLPLPISLRSQVGNCAYGLILMAVFWITEALPLPV TALLPIVIFPILGVSKVKILAHLYFNIMIIPIVDSFSSSLNAXKNMHSSINKLMLGFMLITSFLSMWMSNTATTSMMIPI AQAVLVQLLKTKELQTVPDEARATKELIVKVDVHDNREPKLLKEEDKMRQNKIICFDSVISEARSGEKEDVFDFHSLSDA NKKLCKAFCLSICYAANCGGVATLTGTGPNLVMKGQADFLADGESGITFATWFVFGLPVAFVNCLICWFVVQISFFGFRK LLCANKDKDNSSGVQKVIQVEYDKLGQMNFAEKAVIGHFILLVLLWFTLEPEFVPGWGSLFRKGYVKDSVPAIFIVLSLF VFPSRRREKSDKSADEIPPLMDWKTLNAKLPWGVCILLGGGFALARACTDSGLSYWLADQMSVFSTIPPWAMIFVICLIV SFSTEVTSNTAICTIFMPILAELAKVGFLINILCVIVVTLAINTYGIPYFGLDTYPEWAKRHSDARHTTVISNYTSDISN GTMMSNSTYNMI |
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