Gene
| Gene Model ID | pfu_aug2.0_2335.1_18777 |
|---|---|
| Locus | scaffold2335.1 : 97406 ... 102450 : + |
| To GenomeBrowser | scaffold2335.1:97406..102450 |
| Genes list of scaffold | scaffold2335.1 |
| Synonym | pfu_aug1.0_737.1_58229 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2335.1_18777.t1 | 1 | 1 | Na_sulph_symp | 17 | 260 | 4.69996e-42 | 144.4 | 1.4013e-45 | 6.00036e-42 | 144.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2335.1_18777.t1 | gi|347800619|ref|NP_001231646.1| | solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 [Sus scrofa] | 0.0 |
| pfu_aug2.0_2335.1_18777.t1 | gi|625257548|ref|XP_007620158.1| | PREDICTED: solute carrier family 13 member 2 isoform X2 [Cricetulus griseus] | 0.0 |
| pfu_aug2.0_2335.1_18777.t1 | gi|354466785|ref|XP_003495853.1| | PREDICTED: solute carrier family 13 member 2 isoform X1 [Cricetulus griseus] | 0.0 |
| pfu_aug2.0_2335.1_18777.t1 | gi|395849165|ref|XP_003797205.1| | PREDICTED: solute carrier family 13 member 2 [Otolemur garnettii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2335.1_18777.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2335.1_18777.t1 atggcatccagaaagtgtctagagtctctgagagggaacctgaagagatggattgtaatatgtgttcccattcttctcat gcctttaccgatatgtcttcgttcacaggcagggaattgtgcctatggactcctcataatggccgtattttggatgacag aggcattgcctcttcctgtcacctccctgatccctattgttatatttccaataatgggtatcaccaaagtccaagactta gcacatctttattacaacgatataatatttgtgtttattggagcatactccgtggccgtgtgtgtggagaaatggaatat acataagagatttgctctaagattacttctttctgttggatctgaaccaaaatggttattacttggttttactgtgatca catccttcttgtctatgtggatgggcaacatagctgtctgttccaccatgattcccatggctaatgctgtacttgtacaa cttatcaaaacaaaacagctcagagatagaatgaaagacgaaaggaaaactggtgacgttaaacttgaccttgttgataa aagcgaggtaataaagcaaacaaaggacgttgaaaaagaaaggaaagatctcgataccaaagatgtgaaagaggaggcct tcgacttccaatctttaccagaaggagacaagaagatatgtaaagcttttagcttgtgtatctgctacgcggctaacatc ggcggtatagctaccttgacgggcactgcaccaaatctggtcatgaaaggaaatgcagacatgttagtgttgcatgttaa ga |
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Protein
| Protein ID | pfu_aug2.0_2335.1_18777.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2335.1_18777.t1 MASRKCLESLRGNLKRWIVICVPILLMPLPICLRSQAGNCAYGLLIMAVFWMTEALPLPVTSLIPIVIFPIMGITKVQDL AHLYYNDIIFVFIGAYSVAVCVEKWNIHKRFALRLLLSVGSEPKWLLLGFTVITSFLSMWMGNIAVCSTMIPMANAVLVQ LIKTKQLRDRMKDERKTGDVKLDLVDKSEVIKQTKDVEKERKDLDTKDVKEEAFDFQSLPEGDKKICKAFSLCICYAANI GGIATLTGTAPNLVMKGNADMLVLHVK |
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