Gene
| Gene Model ID | pfu_aug2.0_234.1_13837 |
|---|---|
| Locus | scaffold234.1 : 11005 ... 26025 : - |
| To GenomeBrowser | scaffold234.1:11005..26025 |
| Genes list of scaffold | scaffold234.1 |
| Synonym | pfu_aug1.0_8176.1_09705 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_234.1_13837.t1 | 7 | 1 | WD40 | 557 | 582 | 7.0e-39 | 130.3 | 1.2e-06 | 0.0091 | 15.8 |
| pfu_aug2.0_234.1_13837.t1 | 7 | 2 | WD40 | 608 | 638 | 7.0e-39 | 130.3 | 1.0e-12 | 7.5e-09 | 35.1 |
| pfu_aug2.0_234.1_13837.t1 | 7 | 3 | WD40 | 651 | 687 | 7.0e-39 | 130.3 | 6.5e-06 | 0.048 | 13.5 |
| pfu_aug2.0_234.1_13837.t1 | 7 | 4 | WD40 | 696 | 731 | 7.0e-39 | 130.3 | 6.1e-08 | 0.00045 | 19.9 |
| pfu_aug2.0_234.1_13837.t1 | 7 | 5 | WD40 | 751 | 774 | 7.0e-39 | 130.3 | 4.2e-07 | 0.0031 | 17.3 |
| pfu_aug2.0_234.1_13837.t1 | 7 | 6 | WD40 | 781 | 814 | 7.0e-39 | 130.3 | 1.2e-07 | 0.00088 | 19.0 |
| pfu_aug2.0_234.1_13837.t1 | 7 | 7 | WD40 | 830 | 846 | 7.0e-39 | 130.3 | 0.0031 | 23.0 | 5.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_234.1_13837.t1 | gi|328704358|ref|XP_001949932.2| | PREDICTED: WD repeat-containing protein 47 isoform X1 [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_234.1_13837.t1 | gi|749781017|ref|XP_011144854.1| | PREDICTED: WD repeat-containing protein 47 isoform X1 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_234.1_13837.t1 | gi|665815054|ref|XP_008556165.1| | PREDICTED: WD repeat-containing protein 47 isoform X2 [Microplitis demolitor] | 0.0 |
| pfu_aug2.0_234.1_13837.t1 | gi|746858042|ref|XP_011059778.1| | PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein 47 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_234.1_13837.t1 | gi|751205066|ref|XP_011176105.1| | PREDICTED: WD repeat-containing protein 47 isoform X2 [Solenopsis invicta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_234.1_13837.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_234.1_13837.t1 atggccacgacaggtctatctgtagaagaaacagacattgtcaagttgatatcagaattccttcacaacagagacttgaa tatttccatgctgtccctagagagagagactggaataataaacggagaattttcggacgatttactcttccttcgacagc tgattctggatggacaatgggacgatgctgtggacttcattcagcctcttgcggagatcgatagttttgatgcaaaaaga tttcagtatctgattctgaaacataaatatttagaattgttgtgcatcaagtctgaacccaatgttcttcaaaattacga gtatacggtagatgaggttgtgaaatgccttaataacttagagagcttaactcctagtaaagaggagtacaatagtctat gccttcttctaactacaccaaaattatctgatcatcccgattatttaaattggaaccctagtaatgcacgtgttcggtgc tttaatgatgtcttgccgttggttgaaaagtttcttccatcagaaaagaaggttgaaaagtcagaagttgcaaaagatga cagactgatgcagcttgttttaaaggggatgctgtatgaatcatgtgtcgagtattgtcaacaaagagcaacaacttgtg ataatgtcgaggatgatatgagcttctcgactattttgtcaaattctggtttcagtgatgcagatctaagcttgatttct tggcttcagtatataccaacagatacattctcgtgtccttttgaacaaaagcagtggaacttaaacgtcaaaccattgat taagccaagtttggaagcgtcatggtcagaacaaattttagttaccccaataaaacccaaaatgtttccgcatagtgctg tacccaatgtacgaccaaggtcagcggatcttatgactcgatccttaaatccacagtttgatggactaagtggcgggttg cgacaaggccggcatgatataatgacgcaatcattgaatactaataacattttgtctaaatcgatagccgtaacacctcc acttcatttggacacttctaggagaaatccaatgcagatgtcaatggacagactattctctaaaggagaaatcgtagata cacaagcgtctattccagaggaacctgtcattaatacggtttctccgtttgaaaaaggtactccccctgcgccagcatct gcggagaaaacggaatcttcttcacctcgaatgcttacaccacctagcaacagtccccgtgatgtaaatgtgcgggactc aaactcagaactattgaaagagtttcagaggcagaaattgaaggttcgagagcaacttgcattgtatgagaaacaaaggg aactgatgcagaaagagctcatggagatagaaaataaaagtcaccttattgaacaaaaaagtgaaagtcatgaaaaggct gcaccaaatgaaatccattcaaacaaagaaaatcaacatcaggagatacagaaaggaaaagaactgaccaagaaggagtc acagcctgcaccagtacagaatatcacgcaaagtccacgtaaagcgtcgccacggaaacatcaacagctggataatgagc ctgcccagccaaccatgactgaggaccagagaccacgttacgtagccgtgtcggccctccaggatccccaggctataaga acggtcaccttccacccctctggtacaatgtttgctgtgggttcaaactccaaaactctcagaatctgcgcttttcctga ctgtacaaatctgaggagagaccatgtgacaacagagacgcgagttatgtacaagaaggaaaagcaccataaaggatcta tttactgtatagcctggaatccgctaggagatcttctcgctaccggctcaaacgacaaaaccatcaagatgttccgatac aatcctgacgatagtttacaaggaccagagacagagttgacattccacgcggggacagttcgagacatcgtcttcatgca ggacaccatcaataggtcatcattactcatcagtgggggtgcgggagattgtaaaatatacgtcaccgactgcgagtctg gtatgccggtacgagccatggctgggcattcaggacacgtatatgctctacacacttggggtggctgtatgttcgtcagt ggatctgcagacaagacggccagattctgggatctacgtgcgtcaacggcaatcactgtggtacccagctctacaggtag tgcctttgcgtctgtgtgcgtggatccctcagggagactccttgcatctggtcatgaggacggcactgtgatgttgtacg acatacgaggatctagggggatccagaattataaagcccatagcggggaatgccgaacagcaaggttctctatgaatgct tactacctgattacaggatcgtatgatcacaaaatcatcttgacagatctacatggtgaccttttgcgacctttgcccag tgtcgtagtagcagagcacgatgataaagtcatacagtgccgttggcatccttcacagttggcatttgcaagatgggcag gtaagggaaaaaaatctttgaaaaccttaaaatttacacgtttctga |
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Protein
| Protein ID | pfu_aug2.0_234.1_13837.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_234.1_13837.t1 MATTGLSVEETDIVKLISEFLHNRDLNISMLSLERETGIINGEFSDDLLFLRQLILDGQWDDAVDFIQPLAEIDSFDAKR FQYLILKHKYLELLCIKSEPNVLQNYEYTVDEVVKCLNNLESLTPSKEEYNSLCLLLTTPKLSDHPDYLNWNPSNARVRC FNDVLPLVEKFLPSEKKVEKSEVAKDDRLMQLVLKGMLYESCVEYCQQRATTCDNVEDDMSFSTILSNSGFSDADLSLIS WLQYIPTDTFSCPFEQKQWNLNVKPLIKPSLEASWSEQILVTPIKPKMFPHSAVPNVRPRSADLMTRSLNPQFDGLSGGL RQGRHDIMTQSLNTNNILSKSIAVTPPLHLDTSRRNPMQMSMDRLFSKGEIVDTQASIPEEPVINTVSPFEKGTPPAPAS AEKTESSSPRMLTPPSNSPRDVNVRDSNSELLKEFQRQKLKVREQLALYEKQRELMQKELMEIENKSHLIEQKSESHEKA APNEIHSNKENQHQEIQKGKELTKKESQPAPVQNITQSPRKASPRKHQQLDNEPAQPTMTEDQRPRYVAVSALQDPQAIR TVTFHPSGTMFAVGSNSKTLRICAFPDCTNLRRDHVTTETRVMYKKEKHHKGSIYCIAWNPLGDLLATGSNDKTIKMFRY NPDDSLQGPETELTFHAGTVRDIVFMQDTINRSSLLISGGAGDCKIYVTDCESGMPVRAMAGHSGHVYALHTWGGCMFVS GSADKTARFWDLRASTAITVVPSSTGSAFASVCVDPSGRLLASGHEDGTVMLYDIRGSRGIQNYKAHSGECRTARFSMNA YYLITGSYDHKIILTDLHGDLLRPLPSVVVAEHDDKVIQCRWHPSQLAFARWAGKGKKSLKTLKFTRF |
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