Gene
| Gene Model ID | pfu_aug2.0_234.1_13839 |
|---|---|
| Locus | scaffold234.1 : 59156 ... 71165 : - |
| To GenomeBrowser | scaffold234.1:59156..71165 |
| Genes list of scaffold | scaffold234.1 |
| Synonym | pfu_aug1.0_2972.1_15996 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_234.1_13839.t1 | 1 | 1 | Peptidase_M20 | 83 | 229 | 1.3e-06 | 28.0 | 1.4e-10 | 2.1e-06 | 27.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_234.1_13839.t1 | gi|504136238|ref|XP_004580587.1| | PREDICTED: peptidase M20 domain-containing protein 2 [Ochotona princeps] | 0.0 |
| pfu_aug2.0_234.1_13839.t1 | gi|585686339|ref|XP_006820309.1| | PREDICTED: peptidase M20 domain-containing protein 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_234.1_13839.t1 | gi|115899479|ref|XP_001194804.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_234.1_13839.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_234.1_13839.t1 atggatgtgaaaaacattgccgcagcttccatcgacaaatacgcgacggaattacagaaacttagtaaggaaatatggga aaatccagagttagcctacaaagaattccgcgcacacgatgtcatcgccgattttctcgagaaacacgggttcaaggtga cacgaaaatacaagttagagacggcctttctggctgaatgtgactttgggggtggtgcctcgccccacgtagctgtgcta tgtgagtacgacgccctgccaggaataggacatgcctgtggtcataacctgatcgcagaagtgggtgtggctacgggtat cgccattaaagaagcgctagaatctcaaggatctacggtgggcaagctgtctgtgataggtaccccggcagaggagggta tgtgtggaaaggcagatcttatcaaagagggagtgttcgattgtgtagatgcagagtataaatttggggagaagcattat caagctcttattacgaatgaagtaatggcgaaattgttcgacgacaatggcgcgagagttggactggaatttgaacagag agaagagatcaaacagaaatttggtggttctaccgacatgggtaatgtgtcccatgtggtgccgagcatacatcctaagt ttgacattggaaccacggctagtaaccactctaaagacttcactgtcgctgcagggaaggacttggctcaggtgaacacc ttaaaaatcgcaaaggctcttacaatgacggctctggatatatatacccagagtgaactattgacaaaaattcaagagga gttcaagagaaatgtacctactacgtga |
|
Protein
| Protein ID | pfu_aug2.0_234.1_13839.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_234.1_13839.t1 MDVKNIAAASIDKYATELQKLSKEIWENPELAYKEFRAHDVIADFLEKHGFKVTRKYKLETAFLAECDFGGGASPHVAVL CEYDALPGIGHACGHNLIAEVGVATGIAIKEALESQGSTVGKLSVIGTPAEEGMCGKADLIKEGVFDCVDAEYKFGEKHY QALITNEVMAKLFDDNGARVGLEFEQREEIKQKFGGSTDMGNVSHVVPSIHPKFDIGTTASNHSKDFTVAAGKDLAQVNT LKIAKALTMTALDIYTQSELLTKIQEEFKRNVPTT |
|