Gene
| Gene Model ID | pfu_aug2.0_234.1_13855 |
|---|---|
| Locus | scaffold234.1 : 362288 ... 405286 : - |
| To GenomeBrowser | scaffold234.1:362288..405286 |
| Genes list of scaffold | scaffold234.1 |
| Synonym | pfu_aug1.0_1485.1_07970 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_234.1_13855.t1 | 2 | 1 | DUF4487 | 37 | 70 | 0.0 | 213.4 | 0.27 | 2000.0 | -2.9 |
| pfu_aug2.0_234.1_13855.t1 | 2 | 2 | DUF4487 | 104 | 643 | 0.0 | 213.4 | 0.0 | 0.0 | 208.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_234.1_13855.t1 | gi|524877137|ref|XP_005095275.1| | PREDICTED: uncharacterized protein C1orf112 homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_234.1_13855.t1 | gi|390363612|ref|XP_780816.3| | 0.0 | |
| pfu_aug2.0_234.1_13855.t1 | gi|632955974|ref|XP_007893730.1| | PREDICTED: uncharacterized protein C1orf112 homolog [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_234.1_13855.t1 | gi|585694245|ref|XP_006821785.1| | PREDICTED: uncharacterized protein C1orf112-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_234.1_13855.t1 | gi|742237430|ref|XP_010902734.1| | PREDICTED: uncharacterized protein C1orf112 homolog isoform X3 [Esox lucius] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_234.1_13855.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_234.1_13855.t1 atgtcacagtcacaaaccagtttcctagaagaggtcgtccaatggaattcccagcaatgcttggagaacttaagtgtagc tttacctaagctcttgagcagtggagaattatatggtgattatttgacgtctgtgtcagagcagctctcaagtctcttca agaaagctcacagcttacaagtgtcattcttgcgtttgttagagaagatagagttaggacctgccatatcagaacaagat gtacaggatctctgtatcatttgtgaggggctgtttgaagtgtgcaccattgttacatcactggacattaagcttgttgt tacactgtggaaaattgtatcaaaacaggcgtctttatacaaggaacacctgaagacaagactgaatgtaggacagatgg tcactcacctctgctcagaaatacagactggatatcagtacctgttccaactcctacctgaggtagattcagaaggcatg gttttatcacaaggtgacgagaaaggctttcagaaatctgtaaagatccttggattccagatgaagatttgtaccatgtt gataaaggagtactcggaccgtgtatgtgattgtgaaactaaagtgtacgagatgctgattaatctacatagatcgttgt caccatgtttaaacgccaagaagattcagcagcatcacgatgcggaaatacgacgacagttactcaacgctacagacacc atcgtgacgtcacttctgaccaacagggtgttcttgactgctctgttatctacagataaagtcagtcaacttgagaagga cagcttagctcacctgcttctgacagtaacagtaataaatgtattacctaaatctctagatgaagttttgcttaagtggc tgagtccagtaacataccaaggtgatgaaccaacagaaggaatagtaaaggcagtgtttaatctgacagacaaatgtttg ctagaaatggagttacctgttaatttgccaggacctatgtatgaaggaaaaccccaaagtatgttgagtttataccagta tgtatgtgtacacttgtgtgcttttgtgggaggtttgccggctaaatatttcagtgatgtggaagaaaccctgatacaga atttgatgtgtgatgattgtcaacgttcactattagcatctgatatactgtgcttcatgtccaggtacggcagtgcagac ttgtgcttcagtcatgtagtattgctaatagaaataatgagggagttaccagtgacgtcagtatcacattataatnctgt attactacacagatttccagtgaagacaagcttttggttctggtcgagtgtaagggtgtggtcactgtcccctcagatac agaagggtgtggtcactgagctggcagtccaggggattgacaggctaaggcagttctcgcaaaagatggaaaagacagga caggatttcaataatctgaatgacgccctgaaatgtctaattaacatcacaaattccaggactgctgtggataaattttt atcaaccccctccctctcctccatgttagatgtgctttgtcagctatgggcttccatacttgtatcagactggctgagtg cacaccttactcaggtctctcttggttatttactgcagttatctgccaacctggtagataaacagaccaacggaaaccta ctaaagattttatctgtgataaatgccatactgaagcagagatcagtcagtttcctgcgcctatcaattgccatcttcct acaagagtgtggaaaggtcaaaattggtcctagttttgagcaaagtcagattttgaacaaactaccagattgctttgtgc ctgtgatatccaacagagaggccctggtccaccagactgctgtccatgccttcactcagtttgcggaggagacaccacac gagtcggtagttaccgagtgtatacaacgtaatcaagacgtacaacagacggttgttaactatcttaataaggtgcctgt gagctgtccctcaaacctcagtagacaccagtatcttaccgatcaaatgaagaaaagtagagagagaccacagacaatgg aagttgatgtacctgatactagtgtacagttacagccaagttcaaagcgtccgagaatagaagagcaatccagtgataat cacgcagaggtgcctttgagctgtccctcaaatctcagtagacatcagtatcttgcttaccaaataaagaaaagtagaga gaaaccacagggaatggaagttgatgtacctgatactagtgtacagttacagccaagttcaaaacggccaagaatagaag agcaatcaagtgataatcctagagaggattctgcatcaaccctactacagattttagagctctgtgtgtcaaagttgaaa gaaaatcgtgaactgacttctgacatcaagtcacatttaaaaatagctcaacttgaaattggtaacgtgctcggagaaac aaactaa |
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Protein
| Protein ID | pfu_aug2.0_234.1_13855.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_234.1_13855.t1 MSQSQTSFLEEVVQWNSQQCLENLSVALPKLLSSGELYGDYLTSVSEQLSSLFKKAHSLQVSFLRLLEKIELGPAISEQD VQDLCIICEGLFEVCTIVTSLDIKLVVTLWKIVSKQASLYKEHLKTRLNVGQMVTHLCSEIQTGYQYLFQLLPEVDSEGM VLSQGDEKGFQKSVKILGFQMKICTMLIKEYSDRVCDCETKVYEMLINLHRSLSPCLNAKKIQQHHDAEIRRQLLNATDT IVTSLLTNRVFLTALLSTDKVSQLEKDSLAHLLLTVTVINVLPKSLDEVLLKWLSPVTYQGDEPTEGIVKAVFNLTDKCL LEMELPVNLPGPMYEGKPQSMLSLYQYVCVHLCAFVGGLPAKYFSDVEETLIQNLMCDDCQRSLLASDILCFMSRYGSAD LCFSHVVLLIEIMRELPVTSVSHYNXVLLHRFPVKTSFWFWSSVRVWSLSPQIQKGVVTELAVQGIDRLRQFSQKMEKTG QDFNNLNDALKCLINITNSRTAVDKFLSTPSLSSMLDVLCQLWASILVSDWLSAHLTQVSLGYLLQLSANLVDKQTNGNL LKILSVINAILKQRSVSFLRLSIAIFLQECGKVKIGPSFEQSQILNKLPDCFVPVISNREALVHQTAVHAFTQFAEETPH ESVVTECIQRNQDVQQTVVNYLNKVPVSCPSNLSRHQYLTDQMKKSRERPQTMEVDVPDTSVQLQPSSKRPRIEEQSSDN HAEVPLSCPSNLSRHQYLAYQIKKSREKPQGMEVDVPDTSVQLQPSSKRPRIEEQSSDNPREDSASTLLQILELCVSKLK ENRELTSDIKSHLKIAQLEIGNVLGETN |
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