Gene
| Gene Model ID | pfu_aug2.0_2340.1_02094 |
|---|---|
| Locus | scaffold2340.1 : 33325 ... 53075 : - |
| To GenomeBrowser | scaffold2340.1:33325..53075 |
| Genes list of scaffold | scaffold2340.1 |
| Synonym | pfu_aug1.0_41040.1_19799 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2340.1_02094.t1 | 5 | 1 | EF-hand_1 | 12 | 38 | 3.2e-15 | 54.2 | 0.37 | 300.0 | 1.0 |
| pfu_aug2.0_2340.1_02094.t1 | 5 | 1 | EF-hand_6 | 12 | 38 | 1.5e-14 | 52.4 | 0.35 | 290.0 | 1.7 |
| pfu_aug2.0_2340.1_02094.t1 | 5 | 1 | EF-hand_7 | 14 | 36 | 2.6e-17 | 62.7 | 6.2 | 5100.0 | -2.3 |
| pfu_aug2.0_2340.1_02094.t1 | 4 | 1 | EF-hand_8 | 91 | 122 | 1.1e-07 | 31.2 | 0.00024 | 0.2 | 11.2 |
| pfu_aug2.0_2340.1_02094.t1 | 5 | 2 | EF-hand_7 | 99 | 121 | 2.6e-17 | 62.7 | 0.00013 | 0.1 | 12.7 |
| pfu_aug2.0_2340.1_02094.t1 | 5 | 2 | EF-hand_6 | 99 | 122 | 1.5e-14 | 52.4 | 0.00032 | 0.26 | 11.2 |
| pfu_aug2.0_2340.1_02094.t1 | 5 | 2 | EF-hand_1 | 100 | 122 | 3.2e-15 | 54.2 | 2.1e-05 | 0.017 | 14.3 |
| pfu_aug2.0_2340.1_02094.t1 | 5 | 3 | EF-hand_7 | 449 | 464 | 2.6e-17 | 62.7 | 4.5 | 3700.0 | -1.9 |
| pfu_aug2.0_2340.1_02094.t1 | 5 | 4 | EF-hand_7 | 581 | 662 | 2.6e-17 | 62.7 | 0.00012 | 0.099 | 12.7 |
| pfu_aug2.0_2340.1_02094.t1 | 4 | 2 | EF-hand_8 | 639 | 663 | 1.1e-07 | 31.2 | 0.039 | 32.0 | 4.2 |
| pfu_aug2.0_2340.1_02094.t1 | 5 | 3 | EF-hand_1 | 640 | 663 | 3.2e-15 | 54.2 | 4.1e-05 | 0.034 | 13.4 |
| pfu_aug2.0_2340.1_02094.t1 | 5 | 3 | EF-hand_6 | 641 | 663 | 1.5e-14 | 52.4 | 0.00092 | 0.76 | 9.8 |
| pfu_aug2.0_2340.1_02094.t1 | 5 | 5 | EF-hand_7 | 674 | 732 | 2.6e-17 | 62.7 | 2.6e-12 | 2.1e-09 | 37.3 |
| pfu_aug2.0_2340.1_02094.t1 | 5 | 4 | EF-hand_1 | 674 | 695 | 3.2e-15 | 54.2 | 2.1e-06 | 0.0017 | 17.5 |
| pfu_aug2.0_2340.1_02094.t1 | 5 | 4 | EF-hand_6 | 674 | 696 | 1.5e-14 | 52.4 | 3.5e-06 | 0.0029 | 17.3 |
| pfu_aug2.0_2340.1_02094.t1 | 4 | 3 | EF-hand_8 | 674 | 693 | 1.1e-07 | 31.2 | 0.011 | 9.1 | 5.9 |
| pfu_aug2.0_2340.1_02094.t1 | 4 | 4 | EF-hand_8 | 686 | 733 | 1.1e-07 | 31.2 | 3.9e-06 | 0.0032 | 17.0 |
| pfu_aug2.0_2340.1_02094.t1 | 5 | 5 | EF-hand_6 | 710 | 733 | 1.5e-14 | 52.4 | 0.00016 | 0.13 | 12.2 |
| pfu_aug2.0_2340.1_02094.t1 | 5 | 5 | EF-hand_1 | 711 | 732 | 3.2e-15 | 54.2 | 1.8e-05 | 0.015 | 14.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2340.1_02094.t1 | gi|390368848|ref|XP_003731539.1| | 2.0e-13 | |
| pfu_aug2.0_2340.1_02094.t1 | gi|156385424|ref|XP_001633630.1| | predicted protein [Nematostella vectensis] | 1.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_2340.1_02094.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2340.1_02094.t1 atggcacagcaaaaattggaagaggttaagagcgagtggagagaaatctacaatgcaatcaactgtgataagtcagatgg aataaatatttcagaactagctggtttcatcaaggaaaggaggcccggattggaagattcagatattgctcggaagggga agcaacagtatgactcggcaacgtacgatcctagtgaagttgcgttacggtctgttacgtttatttcccgtttagctacg gctgccatagggcagatgcgcgttttatccaggtttgccacgatttctcacagcaagataaggaacatatttacagactt ggactccgattcggacaaaaaggtgacagaagacgaatttattagagaaatgagcaaaagagatagaaagtcacgaatgt ttaatgtcttcaagttcaatagcatcattaaagataacataaatttgcagcatggaccagacatgcccgtttcggttttg ttacatactgttgacttatcctttggaaatgtggtgttatacaatgagacaggattaagcatttcgggtaatgtttatac atcatattccgacattgaaacttctgatttttccaccattgcagataaatttgcgattcgaaggtacagtcaaagtcatt cgtcagtaattgaatgtgcaatagcctgcatgcaggagtatcgctgtgattactttcattttgatagaataaataagaca tgtactctattagacatgtctaagacggacaaaagacataatggaatctatgactgcccagctggttatgctttatttga acgtggtagtatgaaattctgcctcataatgataccttcactgatgacaagaaacgttgcagaaattacttgctccttct ggaatggtaatatagcaatgcttattgaagaggagaaaaacaacgcagctgcagatgtagcgaggactatatatacagct ggaagttacatagtatccccgccattgattactcgcattacacgtcgtcgatttctgtcatctacatctgtaatgtcttc gtcatcaccaaaaactgacgacacacccgtggcagagtcatctaatacgtcctctgtcccacaaccaccactcctcagcc ccggtccagatattcataactttctatctcagctccatattcctcagattaattatgagactgagtcgggaggtaacatt aatctgactaccgttattctgagtcttctaggcaatcctgtattcatcaacatagtaacgtcagtcctgactccgagttt gtcgcacaccctgcttcctgacatcagatccactataaatcagaccctacaggatggactgcagcctttacgtgagcagc ttgaagctgagtcggcgcgcattgataaaaacgaagaaactatcgccactctaaccgaagaaaatgacgaactccgtggc caactgtatcgtgcagaatcccgccttgatgacgtcgaaacacagcttgaggcactagagcagtacggacgtcgtaattc gctgcgtttccacaatgttgacgttgccgatcctgataataccgatgccagcatcgtacaaatatgtaatgacttgcttg acgttaatatctccgctgatgacatttgccgatcacatcctgttggccgtccgaacaaaaatggtaaacgtcagataata tgtcggctacgcaactggaagttgaaaaatcgtatatacagcaagaaaaagatgctgaagaaccacagtagccgtatatt cgtgaccgaggatctcacgcgctaccgccaagagattgtcacggagatcaccaaagccaagcgggccgggaaagtccatt cgttttggactaatgatggacgaattttcattaagacttgtgagcgcggccagaagctgatggtggaatcgcttgccgac ctgaacaacatatttacagacttggactccgattcggacaaaaaggtgacagaagacgaatttattagagaaatgagcaa aagagatagaaaggaagccctaaaagaattcttccgatcgcttgacgtggatggtaatggatccgtcacccttgaggagg caaagaaggcgagtgtggcgggattcgactctcctgaacaggttgagagttgtttaaatatgtgcgattgtaacgacgac ggaagagtcacagaagacgagttcttgagggcgatggattcttaa |
|
Protein
| Protein ID | pfu_aug2.0_2340.1_02094.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2340.1_02094.t1 MAQQKLEEVKSEWREIYNAINCDKSDGINISELAGFIKERRPGLEDSDIARKGKQQYDSATYDPSEVALRSVTFISRLAT AAIGQMRVLSRFATISHSKIRNIFTDLDSDSDKKVTEDEFIREMSKRDRKSRMFNVFKFNSIIKDNINLQHGPDMPVSVL LHTVDLSFGNVVLYNETGLSISGNVYTSYSDIETSDFSTIADKFAIRRYSQSHSSVIECAIACMQEYRCDYFHFDRINKT CTLLDMSKTDKRHNGIYDCPAGYALFERGSMKFCLIMIPSLMTRNVAEITCSFWNGNIAMLIEEEKNNAAADVARTIYTA GSYIVSPPLITRITRRRFLSSTSVMSSSSPKTDDTPVAESSNTSSVPQPPLLSPGPDIHNFLSQLHIPQINYETESGGNI NLTTVILSLLGNPVFINIVTSVLTPSLSHTLLPDIRSTINQTLQDGLQPLREQLEAESARIDKNEETIATLTEENDELRG QLYRAESRLDDVETQLEALEQYGRRNSLRFHNVDVADPDNTDASIVQICNDLLDVNISADDICRSHPVGRPNKNGKRQII CRLRNWKLKNRIYSKKKMLKNHSSRIFVTEDLTRYRQEIVTEITKAKRAGKVHSFWTNDGRIFIKTCERGQKLMVESLAD LNNIFTDLDSDSDKKVTEDEFIREMSKRDRKEALKEFFRSLDVDGNGSVTLEEAKKASVAGFDSPEQVESCLNMCDCNDD GRVTEDEFLRAMDS |
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