Gene
| Gene Model ID | pfu_aug2.0_2340.1_02097 |
|---|---|
| Locus | scaffold2340.1 : 90926 ... 95778 : + |
| To GenomeBrowser | scaffold2340.1:90926..95778 |
| Genes list of scaffold | scaffold2340.1 |
| Synonym | pfu_aug1.0_5553.1_09138 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calmodulin | GO:0000086 GO:0000922 GO:0004683 GO:0005509 GO:0005513 GO:0005516 GO:0005654 GO:0005814 GO:0005829 GO:0005875 GO:0005954 GO:0006468 GO:0007099 GO:0007268 GO:0007605 GO:0007608 GO:0007616 GO:0008049 GO:0008179 GO:0008582 GO:0016028 GO:0016060 GO:0016061 GO:0016062 GO:0019904 GO:0030048 GO:0030235 GO:0030424 GO:0030425 GO:0030426 GO:0030496 GO:0031475 GO:0031476 GO:0031489 GO:0031800 GO:0035071 GO:0042052 GO:0043388 GO:0043548 GO:0044325 GO:0045211 GO:0046331 GO:0046716 GO:0047485 GO:0048306 GO:0048786 GO:0050790 GO:0050998 GO:0051383 GO:0051489 GO:0051533 GO:0060278 GO:0070855 GO:0072499 GO:0090307 GO:2001020 GO:2001259 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2340.1_02097.t1 | 3 | 1 | EF-hand_8 | 9 | 37 | 1.0e-16 | 60.2 | 2.7e-05 | 0.04 | 13.5 |
| pfu_aug2.0_2340.1_02097.t1 | 3 | 1 | EF-hand_1 | 11 | 38 | 1.9e-25 | 86.1 | 1.3e-09 | 2.0e-06 | 26.6 |
| pfu_aug2.0_2340.1_02097.t1 | 3 | 1 | EF-hand_6 | 11 | 40 | 2.1e-21 | 73.8 | 8.3e-09 | 1.2e-05 | 24.7 |
| pfu_aug2.0_2340.1_02097.t1 | 2 | 1 | EF-hand_7 | 12 | 44 | 7.4e-26 | 90.0 | 2.2e-07 | 0.00033 | 20.7 |
| pfu_aug2.0_2340.1_02097.t1 | 3 | 1 | EF-hand_5 | 12 | 35 | 4.8e-18 | 63.5 | 7.9e-08 | 0.00012 | 21.2 |
| pfu_aug2.0_2340.1_02097.t1 | 2 | 1 | EF-hand_9 | 15 | 54 | 1.4e-08 | 34.5 | 4.0e-05 | 0.059 | 13.2 |
| pfu_aug2.0_2340.1_02097.t1 | 3 | 2 | EF-hand_8 | 78 | 105 | 1.0e-16 | 60.2 | 2.3e-05 | 0.033 | 13.7 |
| pfu_aug2.0_2340.1_02097.t1 | 2 | 2 | EF-hand_7 | 82 | 141 | 7.4e-26 | 90.0 | 2.2e-22 | 3.3e-19 | 68.7 |
| pfu_aug2.0_2340.1_02097.t1 | 3 | 2 | EF-hand_1 | 82 | 109 | 1.9e-25 | 86.1 | 5.6e-12 | 8.2e-09 | 34.1 |
| pfu_aug2.0_2340.1_02097.t1 | 3 | 2 | EF-hand_6 | 82 | 109 | 2.1e-21 | 73.8 | 2.2e-12 | 3.2e-09 | 35.8 |
| pfu_aug2.0_2340.1_02097.t1 | 3 | 2 | EF-hand_5 | 82 | 105 | 4.8e-18 | 63.5 | 2.1e-11 | 3.1e-08 | 32.5 |
| pfu_aug2.0_2340.1_02097.t1 | 2 | 2 | EF-hand_9 | 86 | 141 | 1.4e-08 | 34.5 | 5.1e-07 | 0.00076 | 19.3 |
| pfu_aug2.0_2340.1_02097.t1 | 3 | 3 | EF-hand_8 | 94 | 140 | 1.0e-16 | 60.2 | 1.1e-13 | 1.6e-10 | 40.4 |
| pfu_aug2.0_2340.1_02097.t1 | 3 | 3 | EF-hand_1 | 117 | 142 | 1.9e-25 | 86.1 | 3.1e-09 | 4.5e-06 | 25.5 |
| pfu_aug2.0_2340.1_02097.t1 | 3 | 3 | EF-hand_6 | 120 | 143 | 2.1e-21 | 73.8 | 0.00013 | 0.19 | 11.7 |
| pfu_aug2.0_2340.1_02097.t1 | 3 | 3 | EF-hand_5 | 121 | 140 | 4.8e-18 | 63.5 | 0.00012 | 0.17 | 11.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2340.1_02097.t1 | gi|514691313|ref|XP_004993230.1| | calmodulin [Salpingoeca rosetta] | 0.0 |
| pfu_aug2.0_2340.1_02097.t1 | gi|195998389|ref|XP_002109063.1| | calmodulin [Trichoplax adhaerens] | 0.0 |
| pfu_aug2.0_2340.1_02097.t1 | gi|507973079|ref|XP_004691277.1| | 0.0 | |
| pfu_aug2.0_2340.1_02097.t1 | gi|156399760|ref|XP_001638669.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_2340.1_02097.t1 | gi|751234258|ref|XP_011170849.1| | PREDICTED: calmodulin [Solenopsis invicta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2340.1_02097.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2340.1_02097.t1 atggcgaagttgccaccgcagaaacatgacgagctgaaggaggcgttcgtaatatttgataggaacaacgacaataaagt tgacatgaaggaattagccaccatcatgcgatctatcggcttcagtcctacccaagccgatctccaggccatcacacaag agtgcggaaataggctcctcgacgtcaatgaatgtgaaggtatcatttgcaggagagcgcccccaccggaaacggaagag aacattcgggacgccttcaggattttcgataaagatggtagtggtttcatcagcgcggcagaactgcgccatgttttgac acatttaggcgagaagttaatggatgaagaagtagatgaattgatcagagaggctgacattacaggtgacggtcaagtaa attatgacgaattcgtgaacattttatgttcgggaaagtga |
|
Protein
| Protein ID | pfu_aug2.0_2340.1_02097.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2340.1_02097.t1 MAKLPPQKHDELKEAFVIFDRNNDNKVDMKELATIMRSIGFSPTQADLQAITQECGNRLLDVNECEGIICRRAPPPETEE NIRDAFRIFDKDGSGFISAAELRHVLTHLGEKLMDEEVDELIREADITGDGQVNYDEFVNILCSGK |
|