Gene
| Gene Model ID | pfu_aug2.0_2341.1_05493 |
|---|---|
| Locus | scaffold2341.1 : 8776 ... 38996 : + |
| To GenomeBrowser | scaffold2341.1:8776..38996 |
| Genes list of scaffold | scaffold2341.1 |
| Synonym | pfu_aug1.0_53168.1_12793 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2341.1_05493.t1 | 4 | 1 | BRO1 | 4 | 155 | 0.0 | 358.6 | 0.0 | 2.24208e-44 | 151.7 |
| pfu_aug2.0_2341.1_05493.t1 | 2 | 1 | ALIX_LYPXL_bnd | 37 | 82 | 0.0 | 263.4 | 0.016 | 81.0 | 2.0 |
| pfu_aug2.0_2341.1_05493.t1 | 4 | 2 | BRO1 | 154 | 224 | 0.0 | 358.6 | 3.9e-19 | 1.9e-15 | 56.4 |
| pfu_aug2.0_2341.1_05493.t1 | 4 | 3 | BRO1 | 237 | 417 | 0.0 | 358.6 | 0.0 | 0.0 | 161.3 |
| pfu_aug2.0_2341.1_05493.t1 | 2 | 2 | ALIX_LYPXL_bnd | 443 | 737 | 0.0 | 263.4 | 0.0 | 0.0 | 263.4 |
| pfu_aug2.0_2341.1_05493.t1 | 4 | 4 | BRO1 | 662 | 737 | 0.0 | 358.6 | 0.73 | 3600.0 | -3.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2341.1_05493.t1 | gi|676481898|ref|XP_009062525.1| | hypothetical protein LOTGIDRAFT_207048 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2341.1_05493.t1 | gi|260829229|ref|XP_002609564.1| | hypothetical protein BRAFLDRAFT_129885 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_2341.1_05493.t1 | gi|675854102|ref|XP_009012611.1| | hypothetical protein HELRODRAFT_185356 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_2341.1_05493.t1 | gi|585715593|ref|XP_006825362.1| | PREDICTED: programmed cell death 6-interacting protein-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_2341.1_05493.t1 | gi|507660529|ref|XP_004635317.1| | PREDICTED: programmed cell death 6-interacting protein isoform X3 [Octodon degus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2341.1_05493.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2341.1_05493.t1 atggcgaccttcctggctgtaccgctaaaacagacccaagaagttgatttaataaaacctctgcgtagttttattcaaaa tactttttctcaagctgatccagatgaatataatcaagcactaaatgaatttagcaaactgaggaatttgatgattgcta aatcggtggataaacacgaatcggccttagaaattctgaatcggtactatgatcaactgttggccattgagaacaaacta cctattgcagagaatcagattcgagtcacttttaagtggagagatgcctttgacaaagaatcactattctctggaaaaag aattctggctatttcatcagcagcctatgagaaaatttgtatgttatttaacattgcgtcactacagagtcagattgctg aggtacaaaatcatgataacgacgaagggctcaaaacatcggcaaaatatttccaggaggccatggtggctaagatagcc atgcagtgttctgatctatactctgatgctatgaaactaatgcaactctcctcactcaaagaaatgtggccaaaggaatg gatacctttggtggtcggtaaacaagcagctttccatggtatggcagaatattaccagagctgtgtggctgcaggaacta agagctatggtgaacaaatatcaagacttcagcttcttccattcagacagatgtgctacgtctccccagaccgtatgaag gaggccatggtggctaagatagccatgcagtgttcagatctatactctgatgctatgaaactaatgcaactctcctcact caaagaaatgtggccaaaggaatggatacctttggtggtcggtaaacaagcagctttccacggtatggctgaatattacc agagctgtgtggctgcaggaactaagagctatggtgaacaaatatcaagacttcagaaagctaacgagttgctatcggct gcccagagtcgaggcggagttacattctcctttaaaaatgaacaaggtcgcgtgcaacgtgatttacaggccgcgaaaaa agacaatgactttatatatcacgataaagtgccagatatcaaatcgttaccctcgataggaaaggctgccatagctaagg cttcacccttcccacagacacatctgagtgaaaaatttacagatctgtttgaaaagttagttcccttaccggtatacgag gccatgacagcttttgaaaataggaaaacacaaataatgaacgcagaaataggccggtcaagggaggccactcagctcat gaacagtgtgctggcatctctgaaccttcctgcagcattagaagatttatccggcagtaaagtcccccagtctgtattgg acaaggctaaacaagtacaggatatggggggattacagtatatagacagactgatgaatgaattaccagaattactgacg aggaatagggaaatcttagatgagagcataaatatgctggatgaggaagagaagtcagacaaccagcttagggagcagtt caaagaaaaatggagtcgtactccgtcggacaaacttacaaaaccgatgaaagacgagagcatgaaataccgacagatct tagatacagccattcacgctgacaaagtcgttcaggagaagtatatgaaacacaaacctgccatagacatactgtcaaaa tctccaggagacatagagaagtccctgccctcaggctcgtcaatgagtgggtcacagaactcagggtgtgtacaggacct taaaaagatgatggaagaggtggagacaatcaaggcagagagggaagtcatggagaatgaactcaaacaagctcagtttg atatgaccggtaaattctttgctgccttagcgtctgatgggttgattaacgaggagtccatatcaatagaagaattagac agaacctacggccctctcagggagcaggtcacagccagtatacaaagacaggaaacacttatggctagagtacagaattc taacacagagtttggtcaagccaaggcgtctagtcagagtggagcccagagggagacaatgttgaaggatctagctgcgg gctttgatatgtacatggaacttaaaggcaatctagaggagggaacaaagttttacaatgacctaacaccattattattg aggctacagaacaaaatctctgatttctgttttgctcgaaaaactgagaaagaagaattaatgaatgaccttcaaaaaag tatcgctaagcaaccaacaggcccgccacctgcagcaccctcttaccagcaaccacaagataaaccacaagctaaagtcc cgcctgctaggcctccaccaccaacaattccaagctccgccccctcaaatcaaggggcggggtcacaaccagctccaccc ccttatggttcacagccgcaaggacagagcgggcagcctgatcaacaaaactatggtcagcagggagcttggggcgcacc ttaccctcaatccatgcccatgccagccatgccgtccggatttaatccatacaatccctacatgcaatctggttacccac aaccccctgcatatccaggtcaacaaggcggtttccctgggcaacaaggtggttacccagggcaacaaggtggttacccc ggacaacagggtggttacccagggcaacaaggtggttaccccggttacccccagcaaggttaccctgggcaacaaggtca atatccccagcaaggctacaatgcaagtgcaccaccctatcctcagcaacaatggcgttaa |
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Protein
| Protein ID | pfu_aug2.0_2341.1_05493.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2341.1_05493.t1 MATFLAVPLKQTQEVDLIKPLRSFIQNTFSQADPDEYNQALNEFSKLRNLMIAKSVDKHESALEILNRYYDQLLAIENKL PIAENQIRVTFKWRDAFDKESLFSGKRILAISSAAYEKICMLFNIASLQSQIAEVQNHDNDEGLKTSAKYFQEAMVAKIA MQCSDLYSDAMKLMQLSSLKEMWPKEWIPLVVGKQAAFHGMAEYYQSCVAAGTKSYGEQISRLQLLPFRQMCYVSPDRMK EAMVAKIAMQCSDLYSDAMKLMQLSSLKEMWPKEWIPLVVGKQAAFHGMAEYYQSCVAAGTKSYGEQISRLQKANELLSA AQSRGGVTFSFKNEQGRVQRDLQAAKKDNDFIYHDKVPDIKSLPSIGKAAIAKASPFPQTHLSEKFTDLFEKLVPLPVYE AMTAFENRKTQIMNAEIGRSREATQLMNSVLASLNLPAALEDLSGSKVPQSVLDKAKQVQDMGGLQYIDRLMNELPELLT RNREILDESINMLDEEEKSDNQLREQFKEKWSRTPSDKLTKPMKDESMKYRQILDTAIHADKVVQEKYMKHKPAIDILSK SPGDIEKSLPSGSSMSGSQNSGCVQDLKKMMEEVETIKAEREVMENELKQAQFDMTGKFFAALASDGLINEESISIEELD RTYGPLREQVTASIQRQETLMARVQNSNTEFGQAKASSQSGAQRETMLKDLAAGFDMYMELKGNLEEGTKFYNDLTPLLL RLQNKISDFCFARKTEKEELMNDLQKSIAKQPTGPPPAAPSYQQPQDKPQAKVPPARPPPPTIPSSAPSNQGAGSQPAPP PYGSQPQGQSGQPDQQNYGQQGAWGAPYPQSMPMPAMPSGFNPYNPYMQSGYPQPPAYPGQQGGFPGQQGGYPGQQGGYP GQQGGYPGQQGGYPGYPQQGYPGQQGQYPQQGYNASAPPYPQQQWR |
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