Gene
| Gene Model ID | pfu_aug2.0_2341.1_05495 |
|---|---|
| Locus | scaffold2341.1 : 51336 ... 92818 : + |
| To GenomeBrowser | scaffold2341.1:51336..92818 |
| Genes list of scaffold | scaffold2341.1 |
| Synonym | pfu_aug1.0_3433.1_23314 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| homeobox even-skipped homolog protein 1 | GO:0003677 GO:0005654 GO:0007275 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2341.1_05495.t1 | 2 | 1 | EGF | 67 | 100 | 4.5e-09 | 36.0 | 7.1e-08 | 0.00015 | 21.6 |
| pfu_aug2.0_2341.1_05495.t1 | 2 | 2 | EGF | 108 | 138 | 4.5e-09 | 36.0 | 3.6e-07 | 0.00077 | 19.3 |
| pfu_aug2.0_2341.1_05495.t1 | 2 | 1 | Homeobox | 400 | 444 | 1.9e-33 | 113.8 | 6.4e-15 | 1.3e-11 | 43.8 |
| pfu_aug2.0_2341.1_05495.t1 | 2 | 2 | Homeobox | 460 | 516 | 1.9e-33 | 113.8 | 2.1e-24 | 4.5e-21 | 74.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2341.1_05495.t1 | gi|727016968|ref|XP_010397674.1| | PREDICTED: homeobox even-skipped homolog protein 1 [Corvus cornix cornix] | 6.0e-38 |
| pfu_aug2.0_2341.1_05495.t1 | gi|632965117|ref|XP_007898731.1| | PREDICTED: homeobox even-skipped homolog protein 1 [Callorhinchus milii] | 7.0e-38 |
| pfu_aug2.0_2341.1_05495.t1 | gi|553284|gb|AAA52414.1| | EVX2, partial [Homo sapiens] | 1.0e-37 |
| pfu_aug2.0_2341.1_05495.t1 | gi|734600797|ref|XP_010755502.1| | PREDICTED: LOW QUALITY PROTEIN: homeobox even-skipped homolog protein 1 [Larimichthys crocea] | 1.0e-37 |
| pfu_aug2.0_2341.1_05495.t1 | gi|641692471|ref|XP_008145998.1| | PREDICTED: homeobox even-skipped homolog protein 1 [Eptesicus fuscus] | 2.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_2341.1_05495.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2341.1_05495.t1 atggtgacaaaaggacattggaatgggcagcggaatttgaccagtgcatcacaaatcaaccgatacaaaataaagaggtc tgtaaggaagaacaatggacggaaaaggatacgaccaatatcagattcagataaaagtagttcatcgatgtctaaaaaca gcatgaggcagctggctgatgagaactatggagacccatgtgtaacagacccttgtcgccacggtggtacgtgtatctgg aggaagaatagagttcctagctatatgtgtacatgtcgtcttggctacacgggaagaaggtgtcaaaaagcattgcctga atgtgacaagggtccgtgtcggcaacacggggattgcattgctacagagaaaggatttgtgtgtagatgtacggacggat atgagggaagaacctgtgaaataagaaagacgaacaatgcacatagtcggaacattagaggccaaggtccaatgcttatt gtcaccttcactttaaaagttacacacgaagcctacaccatgcgtccttgcgataacgtctttacatatccatttcgttg cttccatcaaaattccaggacacagcaatatcagctatatgaacagagactgacagatggaaatgtccctacgtcacttc cgccaggtttaatagataccagtaaccagatttgctgcgaaacattttgttgtcgaaatcctaacggtgtagaagtaaca gagaaagcatccaaacacgagaggacaaaaacaaaaaagactaaaagcaagcataaaagaaaacgatcagaatacagtgt ttctccagaactaaagattcagaggagcagtgcgtctcgtcgggaacctagaatacaggaaaacctttcgagaccaatat ctagacagttccattcggtaccgtctgttcttagccatcctcagcaacacctctcctggatgaacaccgagggcgtggag cgggaatccgaaagtagccgtctgcttccaaagcctggatattcaactagcggccataacacgagaccttccgagatcct aaatgctcatcgaatgtcgaacgaaaggatccgtcaaatggacagtaacgaaaaggatgcctttaacttcatggaacatc tcaggacgttattcttcgtcttctcgagacaagtgtacgtcataccttactggaaatccgcagccgaacgtgacattagg cgttacagaacagcattcaccaaggaacaactgaacagactggagaaagaattcctgaaggagaactatgtatcacgacc aaaacgatgtgaacttgcagctcagctcaaccttccagaaagcaccattaagttgtctttctttcttatatcagaatccg cagccgaacgtgacattaggcgttacagaacagcattcaccaaggaacaactgaacagactggagaaagaattcctgaag gagaactatgtatcacgaccaaaacgatgtgaacttgcagctcagctcaaccttccagaaagcaccattaaggtttggtt tcaaaaccgcagaatgaaggacaaacgccagaggatggctctatcctggccatacggtatcccaccagatccccaactgt acgcttatctcgccgccgccgctgcatcatatccttacggcgtgccatcagcgtcatcactccactatccatcactggga ctgaatagcctagcttcctccggaagttcagctttcacaccattatccgtcccaagtccgttacaacctcgccttgatat gctttcatcactccatgcttcaagtccgttacacagagtttccggattagaatcatcgaccgtcccgtctccgactccag cactaggattgccacccagaatgcattttccctggatggaacatgcgccaagtctctgcggcgtctctcctcccaaacca tttacgtgtactccacaccctttgggactcccaggtgcaagttcaattcataacccaatgtcaggactcttagccgcatc tcatttgacatcgtcgccaataaggtcatcacctttgacctcttcacctctttcctcgtcaccgcttacgtcatctccgc ttacctcatctcaactcccattggtgcacaaaccggatgtggacagatcataa |
|
Protein
| Protein ID | pfu_aug2.0_2341.1_05495.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2341.1_05495.t1 MVTKGHWNGQRNLTSASQINRYKIKRSVRKNNGRKRIRPISDSDKSSSSMSKNSMRQLADENYGDPCVTDPCRHGGTCIW RKNRVPSYMCTCRLGYTGRRCQKALPECDKGPCRQHGDCIATEKGFVCRCTDGYEGRTCEIRKTNNAHSRNIRGQGPMLI VTFTLKVTHEAYTMRPCDNVFTYPFRCFHQNSRTQQYQLYEQRLTDGNVPTSLPPGLIDTSNQICCETFCCRNPNGVEVT EKASKHERTKTKKTKSKHKRKRSEYSVSPELKIQRSSASRREPRIQENLSRPISRQFHSVPSVLSHPQQHLSWMNTEGVE RESESSRLLPKPGYSTSGHNTRPSEILNAHRMSNERIRQMDSNEKDAFNFMEHLRTLFFVFSRQVYVIPYWKSAAERDIR RYRTAFTKEQLNRLEKEFLKENYVSRPKRCELAAQLNLPESTIKLSFFLISESAAERDIRRYRTAFTKEQLNRLEKEFLK ENYVSRPKRCELAAQLNLPESTIKVWFQNRRMKDKRQRMALSWPYGIPPDPQLYAYLAAAAASYPYGVPSASSLHYPSLG LNSLASSGSSAFTPLSVPSPLQPRLDMLSSLHASSPLHRVSGLESSTVPSPTPALGLPPRMHFPWMEHAPSLCGVSPPKP FTCTPHPLGLPGASSIHNPMSGLLAASHLTSSPIRSSPLTSSPLSSSPLTSSPLTSSQLPLVHKPDVDRS |
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