Gene
| Gene Model ID | pfu_aug2.0_2346.1_22034 |
|---|---|
| Locus | scaffold2346.1 : 50076 ... 53872 : + |
| To GenomeBrowser | scaffold2346.1:50076..53872 |
| Genes list of scaffold | scaffold2346.1 |
| Synonym | pfu_aug1.0_48292.1_48672 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2346.1_22034.t1 | 1 | 1 | DUF2360 | 1 | 126 | 2.0e-31 | 109.2 | 5.9e-35 | 2.9e-31 | 108.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2346.1_22034.t1 | gi|736202492|ref|XP_010774882.1| | PREDICTED: WASH complex subunit CCDC53 [Notothenia coriiceps] | 1.0e-29 |
| pfu_aug2.0_2346.1_22034.t1 | gi|557019472|ref|XP_006010089.1| | PREDICTED: WASH complex subunit CCDC53 [Latimeria chalumnae] | 2.0e-27 |
| pfu_aug2.0_2346.1_22034.t1 | gi|327272344|ref|XP_003220945.1| | PREDICTED: WASH complex subunit CCDC53 [Anolis carolinensis] | 2.0e-27 |
| pfu_aug2.0_2346.1_22034.t1 | gi|543369424|ref|XP_005527939.1| | PREDICTED: WASH complex subunit CCDC53 isoform X1 [Pseudopodoces humilis] | 5.0e-27 |
| pfu_aug2.0_2346.1_22034.t1 | gi|241829426|ref|XP_002414762.1| | coiled-coil domain-containing protein, putative [Ixodes scapularis] | 9.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_2346.1_22034.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2346.1_22034.t1 atggcaaatagaatacagcagcttgagatcacaatgaatctgttagaaacaaagttgtcatctatacctgggttggagaa tgtcacagcacccaccagcagtcagccagatgctggcacaggtacacaacaaccagcaacacaaacaccagcagctccac agacagcaacaccgcaacctcagggagcacctgctgctgctccacaacctgctgcagaggaacctcctcccccacctgta gaggaagctgcctccaatcctgtctcaaaagatccaagatatgccaagtactttaaaatggtccaagtgggtgtaccaga gcatgctgttaaattgaagatggctaatgaaggactggatgccagtttcttagacacaccggatgcccccgccccaccaa tggaggagacgaagaaagacagcgacagcgatgatttcgacgactcagatgacgatgctagcagtatgagtgactga |
|
Protein
| Protein ID | pfu_aug2.0_2346.1_22034.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2346.1_22034.t1 MANRIQQLEITMNLLETKLSSIPGLENVTAPTSSQPDAGTGTQQPATQTPAAPQTATPQPQGAPAAAPQPAAEEPPPPPV EEAASNPVSKDPRYAKYFKMVQVGVPEHAVKLKMANEGLDASFLDTPDAPAPPMEETKKDSDSDDFDDSDDDASSMSD |
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