Gene
| Gene Model ID | pfu_aug2.0_2348.1_28769 |
|---|---|
| Locus | scaffold2348.1 : 53236 ... 67064 : + |
| To GenomeBrowser | scaffold2348.1:53236..67064 |
| Genes list of scaffold | scaffold2348.1 |
| Synonym | pfu_aug1.0_21144.1_25918 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2348.1_28769.t1 | 1 | 1 | Ras | 28 | 177 | 5.3e-36 | 123.4 | 3.9e-39 | 7.2e-36 | 123.0 |
| pfu_aug2.0_2348.1_28769.t1 | 1 | 1 | Miro | 28 | 141 | 1.4e-13 | 51.4 | 1.3e-16 | 2.4e-13 | 50.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2348.1_28769.t1 | gi|524879929|ref|XP_005096634.1| | PREDICTED: ras-related and estrogen-regulated growth inhibitor-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_2348.1_28769.t1 | gi|585706307|ref|XP_002740505.2| | PREDICTED: ras-related and estrogen-regulated growth inhibitor-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_2348.1_28769.t1 | gi|697496942|ref|XP_009678095.1| | PREDICTED: ras-related and estrogen-regulated growth inhibitor [Struthio camelus australis] | 0.0 |
| pfu_aug2.0_2348.1_28769.t1 | gi|390366998|ref|XP_793764.2| | PREDICTED: ras-related and estrogen-regulated growth inhibitor [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2348.1_28769.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2348.1_28769.t1 atgaattatcgaaattctagttcgaatcttatgaatggatcaagaagcagaagtttgtcgttggcagatagcaatgtttg taaagttgtactactgggatgtcccggtgtaggcaagacagcactgactgttcgctatatgacaaagagattcataggtg aatactgcccaactctagagagtatctacaaatgttacacgaccatcgacgacgaagacgtccgactggagatcctggat acagcaggattggagcatgacggatggaaggacgggtacgccttgtgggcagactgctttattttcgtgtattcaatcac agatcgatatagctttgatgaaataataaacataaaacgacaagtggaggaagtcagacgatctacttctgtttgtggta tacttgtggggaataagagtgacctgcttcacgacagacaagttcccgccaatgaagcctcagaattagcagacgagatt ggttgtaaattccatgaagtgtcggctgctgattggactcaatttgacgatataaagaacatgtttcatggattacatcg agaaaacagacgacagaaattcctgagagaaggaaggcaaagaaaaacaagctcatcagtgaaattcaaacaagcgattc agaaagttatttcagggaaaacaccggcaaaaaggacgcacagtgaaaccaaatga |
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Protein
| Protein ID | pfu_aug2.0_2348.1_28769.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2348.1_28769.t1 MNYRNSSSNLMNGSRSRSLSLADSNVCKVVLLGCPGVGKTALTVRYMTKRFIGEYCPTLESIYKCYTTIDDEDVRLEILD TAGLEHDGWKDGYALWADCFIFVYSITDRYSFDEIINIKRQVEEVRRSTSVCGILVGNKSDLLHDRQVPANEASELADEI GCKFHEVSAADWTQFDDIKNMFHGLHRENRRQKFLREGRQRKTSSSVKFKQAIQKVISGKTPAKRTHSETK |
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