Gene
Gene Model ID | pfu_aug2.0_2348.1_28770 |
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Locus | scaffold2348.1 : 89075 ... 90402 : + |
To GenomeBrowser | scaffold2348.1:89075..90402 |
Genes list of scaffold | scaffold2348.1 |
Synonym | pfu_aug1.0_61157.1_63590 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_2348.1_28770.t1 | 1 | 1 | HLH | 57 | 106 | 5.0e-13 | 48.5 | 7.7e-17 | 1.1e-12 | 47.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_2348.1_28770.t1 | gi|657575731|ref|XP_008291615.1| | PREDICTED: oligodendrocyte transcription factor 3-like [Stegastes partitus] | 3.0e-28 |
pfu_aug2.0_2348.1_28770.t1 | gi|113931464|ref|NP_001039180.1| | oligodendrocyte transcription factor 4 [Xenopus (Silurana) tropicalis] | 4.0e-28 |
pfu_aug2.0_2348.1_28770.t1 | gi|742135888|ref|XP_010877582.1| | PREDICTED: oligodendrocyte transcription factor 3-like [Esox lucius] | 6.0e-28 |
pfu_aug2.0_2348.1_28770.t1 | gi|432940057|ref|XP_004082696.1| | PREDICTED: oligodendrocyte transcription factor 3-like [Oryzias latipes] | 7.0e-28 |
pfu_aug2.0_2348.1_28770.t1 | gi|641770049|ref|XP_008169289.1| | PREDICTED: oligodendrocyte transcription factor 3-like [Chrysemys picta bellii] | 1.0e-27 |
Transcript
Transcript ID | pfu_aug2.0_2348.1_28770.t1 |
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Definition | - |
>pfu_aug2.0_2348.1_28770.t1 atggctttgtcagattacgaaattaatgtggacgtcattgaagaagacgcatcttatgatagtgggatctatgaaaatga cacttctaatgactcgttgatttcgtcagagttttccagtcctaaagtgcgctcaaaaacacgtgtaccggaagacatca gactgcgcatcaacagcagagagcgacagcgcatgcacgatttgaattcagcattagaaggtctaagacaggtgatgcca tactctaatggaccaaacgtgaagaaactgtcaaaaatgtcgactttactattagccaggaattacattgtgatgttgac acgttcacttgatgaaatgaagaaactagtacaggacttatcggcgaacaagcccgtcccgatgccgacgatgccaccga cagcgcctatcatggaggtaagaccaacagcgcctatctcggatgtaagaccaacagcgcctatcccggatgtaagcgga attgcgcatgtcatgtatccatcagtaccgccaactacacgctactcgccgtacaaggtaccctcctcgccttattcgcc ctctacgcattattcgtcgactcctacaagaattcgtcatcatccgtacggccggatctcttcgactccgctttcggatt cgacaaatattcgtccagaatcagaacctgtgacatcaactcccgctgtaccacacaagttttccgtcgcctctttgtta aaggacaccggaagttcaccgaaagtgtctccnggatgtaagcggaattgcgcatgtcatgtatccatcagtaccgccaa ctatacgttactcgccgtacaaggtaccctcctcgccttattcgccctctacgcattattcgtcgactcctacaagaatt cgtcatcatccgtacggccggatctcttcgactccgctttcggattcgacaaatattcgtccagaatcggaacctgtgac atcaactcccgctgtaccacacaagttttccgtcgcctctttgttaaaggacaccggaagttcaccgaaagtgttttcac ctag |
Protein
Protein ID | pfu_aug2.0_2348.1_28770.t1 |
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Definition | - |
>pfu_aug2.0_2348.1_28770.t1 MALSDYEINVDVIEEDASYDSGIYENDTSNDSLISSEFSSPKVRSKTRVPEDIRLRINSRERQRMHDLNSALEGLRQVMP YSNGPNVKKLSKMSTLLLARNYIVMLTRSLDEMKKLVQDLSANKPVPMPTMPPTAPIMEVRPTAPISDVRPTAPIPDVSG IAHVMYPSVPPTTRYSPYKVPSSPYSPSTHYSSTPTRIRHHPYGRISSTPLSDSTNIRPESEPVTSTPAVPHKFSVASLL KDTGSSPKVSXGCKRNCACHVSISTANYTLLAVQGTLLALFALYALFVDSYKNSSSSVRPDLFDSAFGFDKYSSRIGTCD INSRCTTQVFRRLFVKGHRKFTESVFT |