Gene
Gene Model ID | pfu_aug2.0_2348.1_28771 |
---|---|
Locus | scaffold2348.1 : 93606 ... 98755 : - |
To GenomeBrowser | scaffold2348.1:93606..98755 |
Genes list of scaffold | scaffold2348.1 |
Synonym | pfu_aug1.0_15990.1_46930 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_2348.1_28771.t1 | 2 | 1 | CARD | 15 | 95 | 1.5e-08 | 34.3 | 2.2e-12 | 3.2e-08 | 33.2 |
pfu_aug2.0_2348.1_28771.t1 | 2 | 2 | CARD | 203 | 218 | 1.5e-08 | 34.3 | 0.75 | 11000.0 | -3.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_2348.1_28771.t1 | gi|260814061|ref|XP_002601734.1| | hypothetical protein BRAFLDRAFT_215159 [Branchiostoma floridae] | 1.0e-06 |
Transcript
Transcript ID | pfu_aug2.0_2348.1_28771.t1 |
---|---|
Definition | - |
>pfu_aug2.0_2348.1_28771.t1 atggcgtccgatcaaaaaagaagaatcagcgaaatttacgaaaaagctttgtccgcaaactggataaatataagcaaaaa tttggatccacgtgacattgtcgaccatcttattccaaatgacgtcatcaccattgaagaacgtggggacatttggaggt tagatgaccgagcttcccgacttcagaagttgatggacattgtgattttacgaggggatagaagatttggggactttttg gaagtgctcaaaaatcaaaattacgagtggttgtacaacgctattgctaaaacgattgaagaggttagagataatcctaa catacagtacgcaaatgaacattccagaggtccggaactcgccacttcaagaagaagtgttttacctcttacatgtacac gtcgtccaagaagtcctctagagcacgaaatttctgtacaaaggcatctaaatgttccggattctttatctcttgaaagt caaaaatcgaacaatttcccgccaaaatcgcaggaacagaagatgtatgatatgccatcgtctataggcgcgtcaccctc gtcagaagtgtacgatgacgccatgtctaaaacatcaaattacgagtcatttcttgtagaaactgtatcaaacgattatg aacagcttcattctcagccaccaacaaacgaagatgtacatccgctatcaagaaatagatcttcttcgccgtcagaggaa gttcagaatcctccaatgcggtgttcatctacgtcggctcaatacgttaatacttccgtatccgtttcttacgaagacca gcctgtatactcaaatatggacgaaagtcaaagaccgctgtcggaatgtaaacgaattatgctgaaaaaccccgagctga tctctatacacgatgcagtttcagaacgtcttcctcacgggctgagggaaatagaggactgcctgggttggagtccctgt gttaatgatgccaataaaaggaaggttccgcctatctcagcatctgattgtgatggtaacttctacctctggtacagtat caaagctgaggccattgtactgaccatcaggtga |
Protein
Protein ID | pfu_aug2.0_2348.1_28771.t1 |
---|---|
Definition | - |
>pfu_aug2.0_2348.1_28771.t1 MASDQKRRISEIYEKALSANWINISKNLDPRDIVDHLIPNDVITIEERGDIWRLDDRASRLQKLMDIVILRGDRRFGDFL EVLKNQNYEWLYNAIAKTIEEVRDNPNIQYANEHSRGPELATSRRSVLPLTCTRRPRSPLEHEISVQRHLNVPDSLSLES QKSNNFPPKSQEQKMYDMPSSIGASPSSEVYDDAMSKTSNYESFLVETVSNDYEQLHSQPPTNEDVHPLSRNRSSSPSEE VQNPPMRCSSTSAQYVNTSVSVSYEDQPVYSNMDESQRPLSECKRIMLKNPELISIHDAVSERLPHGLREIEDCLGWSPC VNDANKRKVPPISASDCDGNFYLWYSIKAEAIVLTIR |