Gene
| Gene Model ID | pfu_aug2.0_235.1_17154 |
|---|---|
| Locus | scaffold235.1 : 1 ... 52685 : - |
| To GenomeBrowser | scaffold235.1:1..52685 |
| Genes list of scaffold | scaffold235.1 |
| Synonym | pfu_aug1.0_5720.1_45280 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_235.1_17154.t1 | 1 | 1 | SNARE | 21 | 78 | 3.4e-07 | 29.8 | 1.5e-10 | 7.6e-07 | 28.7 |
| pfu_aug2.0_235.1_17154.t1 | 1 | 1 | Peptidase_M23 | 1019 | 1118 | 2.1e-06 | 27.6 | 2.2e-09 | 1.1e-05 | 25.4 |
Transcript
| Transcript ID | pfu_aug2.0_235.1_17154.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_235.1_17154.t1 atggcaggttttcgcaataacagaaatggtatggctaaaacagaggagatgcttgataatgagaatcaacaaagagtgga aggactggcgtctaaagtctccatgttaagaaatatagcattagatattgaaacagaaactaaagactccaacagatatt tggatgacatgggaggtgactttgacagcatgcagggattattaggtggtactgttaacagagtgtcacatataagttac acaaacatagaacagacagacgaaggacaggaacttctgctgaagatctacacattcagattttctcctgccaatgatcc aactctaaatggacaagatctggatttttcaaattggttttcatttgtgattaccagcagaggagagattctccgagtct accatccagatcatgaaaatggtgaagtacttgctatcaagaaaggctttgctgctttacttgctgccaaacttcacagg gaaggagaggttggaggtaaacatggacctgatggatggacgtaccatgtccaagagatggggcatgaaggctttcacaa tgcaacatacactatacagaaaacaaatgaaggcttaaaattcgtcaaaatacgacatggccatcctgttaagtatgcaa aaggaaattataaaaagacaatacattaccatgagtatctcggaaccattcataaagttctaatagaggaagactttaca actcctagtcgtcagccagggtttgatcctcaccatgggatgcgtaaagtgaagcctgttagtaacttctcttctattga atacccagagatgaaggcaatgagcagtggagaacttcatttcttaacacgcaatgctgcacaaaagttaacggaccata ggcctagtaccaaaatacaaacaggatccatcaatatcggaaacatgaagagaaacaagccatcaaacgttaacatcacc caggctcgccttgatatccatactaatcttacttgtatgcagaatcaaccacaacaaggttcacctgtactgaataaatg cttccataatatcatcagtatactaaacattctaccagagagtgagatagacaaaatagcccagtattactttcagtact taaaaccaagttcctggcagaatcgttttaacactgagtccatgttagatgccctgggagtcctaggcacagaccaggct caacagcttctgaatagacttgtgttacgtaatcccaaaccaaaccatgacttgatgcagagggtgctagtacagattgt gtctaaagacgaccctccacatgaggccgccaatgccttacttaagacagctctgtttgacgatgaccagaatgtcagat acgaagctctcctactttaccaagctcatccaaagtctagtgttattactccccttaataatgtgagaccagcagggaac caaacacagcacatagaggatccttacgaatcggatatcagtaatctggaacttcatcatcgatcaaaaagaggattctg ggatggcgtagagttcagacttgaagctccgagtgttgattggcgtaaaatcctagggtctgaagatataggagcttctt ttggtgtcatcatgataaatcttctggatctaaaaattggtaaggtttacaagatgagaccagcagggaaccaaacacag cacatagaggatccttacgaatcggatatcagtaatctggaacttcatcatcgatcaaaaagaggattctgggatggcgt agagttcagacttgaagctccgagtgttgattggcgtaaaatcctagggtctgaagatataggagcttcttttggtgtca tcatgataaatcttctggatctaaaaattgctccattaagtggatacttgagactgaacgtccatgatgaagcctacgct cgagttcatctgggaatcgttaacgtcaatctggatttctttgtggccagaatttgtattaagggaggtgctgaatataa tttcaacatccttcagggaaatgaaatgaagaagataatatcgttagtgacccagtttgatgagaagattaaggatattg tcgacgggataagtgctggcgtttcgttctttaagagtctcatcactgggagaataactataaaggatatagtcttggac cttgtagatgctctcaaagagctcccaaaccaagtatggagtcttagaactaaggcaagaacctacatgcagatgatggg ggaattatgtgatgattgtctaccagagtttttacttccaacaaagaaacttatagaaaaaatttcgactctgtatgctg acatcaaaacagatgttatgaacttttacaatgctatagtggaatcagtcacaatagtcattccccacagtgctaagacc atctatgaatctatcctggatattgtagaaggatttaaaaaactcctgaaggatccaaaaactgccatccaagccattgg cagaggagctctcaaaatatttgcatcaatcgtgcaattagcagatgctaaaaatagaacacaggaggcatgcttctttc ttaaggatgagaagccgtattggtgggacttgagtgcacagtatgaagaagtgaaagctctagcaacagaagccgttaaa gagatttccgccgatggacctgaatgggtctatgatacgtttgtaggaggagatgaagtggaagaactctcaaaaggaaa actcaattctagtgatgtcaaacaagaaatagttgacaatatcacccgtctgatgtcagagatgttaaatccttttactg atggattacgtggattagcagatagattcctgaagagatacggagacttgttcacatttgtcaagtctgttaaagaagca tatactacactgaaggaagggtatgacaatgctcgagctatcatagacggtatatttggccccaaggcccacaaggattt ccctcgtctaactcgtctgaggggtggtggctgtgctgggacagggttctatccatcatcactgaagatggatggggaat tctttgagtatgaagatgaagggatcgatctacaagtcgaggagggagatgatgttgtagcaccattccctggtactata gaactgacagatgtaccaaaccaggtcctgattaaagcacaagggggctctattagtgactttgaaatcttacttactaa tatagaacccaatgacaccatcctgtctccagatgatgacaatttcatagagaaacaggttcaggctggacagatcattg gtcaagcaacagaatcaaattgttcagcttttaatcatatccacttctccatatataaaactaacgacacaaatgaaggc tgggtggatccatctcgattccttgccaagagattcccactactgccaaactttgctacaatctgtgatgactataagct tgtcttcaagtttgagaccatagcagctggggctatagttggtataggggggaagaagaggaatgatacatcacctgcca ggaaaaatcaggatgattacaaactccttatacctcctgaagaagaagatgccccggcacaggatctagaccaaatcaaa agtgataatgatggaatgtataagaaaacccaagatgccacaatacctgaaaactttgagccaaagaatggatccaagat gggtccttttagaactctactttcgaaagctgacagttttctgcagaagttttctgtacgacgtttaaagctgggaacca ttgtttcatttttggagatacttaacatacccgagagtaaagcaaaaatgggtgaggtcgtcagatctatcaggaaactg gtggagtttgaaccttgctttaatccctatgaaatgacagatgaacaactacataatgaattaacagagaggggtgacac gtcccttggtacccgggatgaaatgatcaagaaaattaccaaacaagaccaccggcaagaagattcaattccaacaggga tcactttgagcattttaggagggatggaagtcattttcaagtactccctacagaagaccgggggtggtttgtttgctaca ttcggaacgagttattgtaataaagatgattacgacacgtgtgtgctgaacttttacctgcttagagatgccttactacc tcttcctacctgtgatgacaatggcaaattcattatgcccaatgtgagctacaaagaattcttcagtaaagagtcaaaca ggaaaatattgaagagacctggaaaggaggtagtttccaccagtaggacaaacatacaaaaggcggctctagaaatgctt cttctccctgaggacattgttgatcactcaggcccttgcctacgtccaagcacatatacagacaaccaaatcaaaaactt actggaaaaacgaggactagacattagtggtaccagggcagatcagaatgaacggattaaagtctatgacaccagtaaag atgagtatgtgcctctcagcagtcgtgtgggattcaaatacagcataaatcgtaatgcaggaagagataaaacaattata agttttggagttaagatttgtaaagatgacagcacttgttctataaatgattatgttataactgacatggagataccata ccctgcatgtagtcaggactttacactaccaggtgatggtacagtcagtggtcttattcaagtaataggaggaaaaatga cagcagaagcttttagtcttatcttgaagaaattagctttagagaaacatttcacatcagggccttgtgtgcctactcca agcccccaagagtgtactgattggtcggttaactacagaaaatggcttccggtctcggccaaacaaatggtgacttgtga gctacctgacggttgttacggtttacaatgctgccttgacataactttcactgtaccactcggtgtagaatctgtgagtt ataatatcccattccacttcaagctggacccctgtgattacactgtagatgtgggatttggacctttcagacattttgaa aaactgctcacatatgactggggtaaagaaactgtattaaccattggtagcggagatcccaaaccagttcagattaagta cacgatacagcggttaccagaggatcagggattccaagtttccctcaatgtgctgatatgtttccctatggataatcagg tatactgtctgccgttacagaatggtctggaactacttaggaatgccatcatacctgtgtgtaagaccagaactgtcgta gagtaccaggatttctcattgacccagtggatgaaggacaattctctgactgccgactctttcgctgccgagggttctgt gggagcggtagatctgctattggaacagctaaacttgacccagttctttggtccagattgtgacaggaccaggggattat tctcaccaagtgtcaaaggattcagaaattcctgcccattgcccatatttcagttgccgtctatagatgatactatgatt acatgttctataccatcatactgtacgggtattgagtgctgctccgaggttcccctccttaaacttaagttacgtttttg gctgtatgtggacacatgtacatatgatatgtattatggattggaaacacagtcatataatgcaacactcttcaactata aatacggagataaaatcagagtttctgtgatagaaaatcttctttatatggaattcagcttgatacaaattgtgaacaca aaccagatgaagtttgatgtgaagatacatgtatgtttagagaaggatggtgtatgtacttctgatgaccctggctatct ctctatggatgtaatgaagaacacggacgtccccttggtggactgtacggccaacaccctatcctccgacagtgaagctt tctcactgagtaaatggttgagagggaagaacctagccactgatgctgagttaacaccgaggatagtggagcttcttcta cagcagttaggcatatctagcaacatgatggaccctaaatgtgacagagatggaagtgactataaaccacgtacagatgg ctggaaaaatgattgttctgcggacgtgaccttgaagaagatccgtggtccaaccacatgtcacatggataattcctgta caagcgtggactgctgtgtggaagttgctaaaatggctacagggttcaggacctacctgatgtttgatgcctgtaactat cgtctgtactcaggcattgacaaactgtcacagaatatctcactattaggttacaaatggggtatgcttctcaatcatgc ttttatagatttctgagagaccaaacgtttgaatttgaaaggtgtaatccagctggactacaacgtgtatgatctgtact ctgagggagccttccttgttaacatgaatataaaagtctgtctggaggcccaaggaaactgtctgttcatacttcctata tttgacaatgtgaaattaccaaagcagccatgtacagcaagtcaaaagtttgcagatcctgatttctccctaagcttgtg gcaagctgtaaacaatgtaccgagccctgtacgtggaattaacctggataaactccttgacaaactgggaatgtcttcat atctcctggattctccctgcagtaaaacagacccacaatttgttaatgccacatctggatgggatgatg |
|
Protein
| Protein ID | pfu_aug2.0_235.1_17154.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_235.1_17154.t1 MAGFRNNRNGMAKTEEMLDNENQQRVEGLASKVSMLRNIALDIETETKDSNRYLDDMGGDFDSMQGLLGGTVNRVSHISY TNIEQTDEGQELLLKIYTFRFSPANDPTLNGQDLDFSNWFSFVITSRGEILRVYHPDHENGEVLAIKKGFAALLAAKLHR EGEVGGKHGPDGWTYHVQEMGHEGFHNATYTIQKTNEGLKFVKIRHGHPVKYAKGNYKKTIHYHEYLGTIHKVLIEEDFT TPSRQPGFDPHHGMRKVKPVSNFSSIEYPEMKAMSSGELHFLTRNAAQKLTDHRPSTKIQTGSINIGNMKRNKPSNVNIT QARLDIHTNLTCMQNQPQQGSPVLNKCFHNIISILNILPESEIDKIAQYYFQYLKPSSWQNRFNTESMLDALGVLGTDQA QQLLNRLVLRNPKPNHDLMQRVLVQIVSKDDPPHEAANALLKTALFDDDQNVRYEALLLYQAHPKSSVITPLNNVRPAGN QTQHIEDPYESDISNLELHHRSKRGFWDGVEFRLEAPSVDWRKILGSEDIGASFGVIMINLLDLKIGKVYKMRPAGNQTQ HIEDPYESDISNLELHHRSKRGFWDGVEFRLEAPSVDWRKILGSEDIGASFGVIMINLLDLKIAPLSGYLRLNVHDEAYA RVHLGIVNVNLDFFVARICIKGGAEYNFNILQGNEMKKIISLVTQFDEKIKDIVDGISAGVSFFKSLITGRITIKDIVLD LVDALKELPNQVWSLRTKARTYMQMMGELCDDCLPEFLLPTKKLIEKISTLYADIKTDVMNFYNAIVESVTIVIPHSAKT IYESILDIVEGFKKLLKDPKTAIQAIGRGALKIFASIVQLADAKNRTQEACFFLKDEKPYWWDLSAQYEEVKALATEAVK EISADGPEWVYDTFVGGDEVEELSKGKLNSSDVKQEIVDNITRLMSEMLNPFTDGLRGLADRFLKRYGDLFTFVKSVKEA YTTLKEGYDNARAIIDGIFGPKAHKDFPRLTRLRGGGCAGTGFYPSSLKMDGEFFEYEDEGIDLQVEEGDDVVAPFPGTI ELTDVPNQVLIKAQGGSISDFEILLTNIEPNDTILSPDDDNFIEKQVQAGQIIGQATESNCSAFNHIHFSIYKTNDTNEG WVDPSRFLAKRFPLLPNFATICDDYKLVFKFETIAAGAIVGIGGKKRNDTSPARKNQDDYKLLIPPEEEDAPAQDLDQIK SDNDGMYKKTQDATIPENFEPKNGSKMGPFRTLLSKADSFLQKFSVRRLKLGTIVSFLEILNIPESKAKMGEVVRSIRKL VEFEPCFNPYEMTDEQLHNELTERGDTSLGTRDEMIKKITKQDHRQEDSIPTGITLSILGGMEVIFKYSLQKTGGGLFAT FGTSYCNKDDYDTCVLNFYLLRDALLPLPTCDDNGKFIMPNVSYKEFFSKESNRKILKRPGKEVVSTSRTNIQKAALEML LLPEDIVDHSGPCLRPSTYTDNQIKNLLEKRGLDISGTRADQNERIKVYDTSKDEYVPLSSRVGFKYSINRNAGRDKTII SFGVKICKDDSTCSINDYVITDMEIPYPACSQDFTLPGDGTVSGLIQVIGGKMTAEAFSLILKKLALEKHFTSGPCVPTP SPQECTDWSVNYRKWLPVSAKQMVTCELPDGCYGLQCCLDITFTVPLGVESVSYNIPFHFKLDPCDYTVDVGFGPFRHFE KLLTYDWGKETVLTIGSGDPKPVQIKYTIQRLPEDQGFQVSLNVLICFPMDNQVYCLPLQNGLELLRNAIIPVCKTRTVV EYQDFSLTQWMKDNSLTADSFAAEGSVGAVDLLLEQLNLTQFFGPDCDRTRGLFSPSVKGFRNSCPLPIFQLPSIDDTMI TCSIPSYCTGIECCSEVPLLKLKLRFWLYVDTCTYDMYYGLETQSYNATLFNYKYGDKIRVSVIENLLYMEFSLIQIVNT NQMKFDVKIHVCLEKDGVCTSDDPGYLSMDVMKNTDVPLVDCTANTLSSDSEAFSLSKWLRGKNLATDAELTPRIVELLL QQLGISSNMMDPKCDRDGSDYKPRTDGWKNDCSADVTLKKIRGPTTCHMDNSCTSVDCCVEVAKMATGFRTYLMFDACNY RLYSGIDKLSQNISLLGYKWGMLLNHAFIDFXETKRLNLKGVIQLDYNVYDLYSEGAFLVNMNIKVCLEAQGNCLFILPI FDNVKLPKQPCTASQKFADPDFSLSLWQAVNNVPSPVRGINLDKLLDKLGMSSYLLDSPCSKTDPQFVNATSGWDD |
|