Gene
| Gene Model ID | pfu_aug2.0_235.1_17155 |
|---|---|
| Locus | scaffold235.1 : 62306 ... 72158 : + |
| To GenomeBrowser | scaffold235.1:62306..72158 |
| Genes list of scaffold | scaffold235.1 |
| Synonym | pfu_aug1.0_9359.1_53343 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_235.1_17155.t1 | 3 | 1 | HSP20 | 9 | 35 | 1.4e-29 | 101.9 | 1.7 | 8500.0 | -3.4 |
| pfu_aug2.0_235.1_17155.t1 | 3 | 2 | HSP20 | 87 | 165 | 1.4e-29 | 101.9 | 7.0e-18 | 3.5e-14 | 52.5 |
| pfu_aug2.0_235.1_17155.t1 | 3 | 3 | HSP20 | 283 | 364 | 1.4e-29 | 101.9 | 8.8e-18 | 4.4e-14 | 52.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_235.1_17155.t1 | gi|524906134|ref|XP_005108409.1| | PREDICTED: flocculation protein FLO11-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_235.1_17155.t1 | gi|676427941|ref|XP_009045112.1| | hypothetical protein LOTGIDRAFT_136700, partial [Lottia gigantea] | 1.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_235.1_17155.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_235.1_17155.t1 atggctcaccgcattcctatccatcaggacgaccttagcttcgaggaacgacagaacaaagtatgggaggacatggagaa agacatggaacgacgtagacaggagtgggaggacgaaatagaacgcatgcgcagtgatttctttcagctgaagccaaatt ctaacgggaaactagacgctctcactgataaaataagtgtgaaagacacaatggatgatacaaaaacagttattgaaaaa gaccacaatggaagacctgtgttccgggcaaggttcaacgtccatgaatacaaaccggaagaggtcaacgtcaaaatgga cgctgacaagcttatagtgtacgcaaagcacgaggagaaggacggacataaatctgttagtagggaatttagcagggagg ttaatatccccaaagaggtggatcctatggcgttacagtgtacaatatctaaagacggaatcctgaccgccgaggcacct atgccggtaccggggtaccaacaaatcaccgactctggatacggcacacagcgcataattcctacggctactccccttgt atcaagtcccccgtcccggaatgtccccaccgtaatgccgtcacaaacaggagtacctaccacccatacctctactttta cgacatttatgtcgccaaaaggtgcgacttcgacgccagcacctccaccgccatcttactccaccggaaccggaagtacg catcagtccaccaatgctaacagtgtacacaggtctttctcgccgcagtcaagcgtttcatcgcacgtttcgtcgagctc caaatatgaaacgcgaagtggttccggttcaccgcacagtatgatgtcggaacgtgacaagaggtaccgcgttgaaatcg acatcgaggatttcaatccagaagacttaaatataaaaactgtggataaaaagttggttattactgccaggaaagaggag agagtcggttcgcgtacgtcaagcaaagaacttaatagagagtttacgcttcccgacacggtcgacccaatgcaagtcaa agctttcttttccgattccgggaaacttctcgtggaggctccttatttgcgctctatcacagtcagtcacgagggtagcc cacattttggtacatcttcccctctcagtggatcattgatcagataa |
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Protein
| Protein ID | pfu_aug2.0_235.1_17155.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_235.1_17155.t1 MAHRIPIHQDDLSFEERQNKVWEDMEKDMERRRQEWEDEIERMRSDFFQLKPNSNGKLDALTDKISVKDTMDDTKTVIEK DHNGRPVFRARFNVHEYKPEEVNVKMDADKLIVYAKHEEKDGHKSVSREFSREVNIPKEVDPMALQCTISKDGILTAEAP MPVPGYQQITDSGYGTQRIIPTATPLVSSPPSRNVPTVMPSQTGVPTTHTSTFTTFMSPKGATSTPAPPPPSYSTGTGST HQSTNANSVHRSFSPQSSVSSHVSSSSKYETRSGSGSPHSMMSERDKRYRVEIDIEDFNPEDLNIKTVDKKLVITARKEE RVGSRTSSKELNREFTLPDTVDPMQVKAFFSDSGKLLVEAPYLRSITVSHEGSPHFGTSSPLSGSLIR |
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