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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_235.1_17162
Locus scaffold235.1 : 298010 ... 308718 : +
To GenomeBrowser scaffold235.1:298010..308718
Genes list of scaffold scaffold235.1
Synonym pfu_aug1.0_7589.1_24242

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_235.1_17162.t1 1 1 CARD 41 122 1.5e-08 34.3 1.9e-12 2.8e-08 33.4

Transcript
Transcript IDpfu_aug2.0_235.1_17162.t1
Definition-
>pfu_aug2.0_235.1_17162.t1
atgatcttatgtgaatggtcaacagaatgtcaaccaaaagtatcgacacttgaaaaggcttgttcagagcttgatcgctc
cattctcacagtgacccctttgagcaaacaggacactacagttctagagaggaacatggcttttctaattgaggagatga
tggaggtatcattgttgataccgtaccttacagcagatggaatactctctttactgtctggaaaatacataacagataaa
aagggcagatcagataggataatggcgttgttggatatactgtcaacaaacgagagaggtctggatgcctttatttctgc
actacagaaaacagaccagtgtcatatctcacagagactacaagattcgcttttccttgaagatttccggcaacacagag
aagatacgaaactcaaagaatctgacctcgtggatgtaaaaacatcaagcgagaatatacgagaaaacaaaatgaattct
agtagcgcacattccacgacagtcaaagggatacagggtacaacttccgaggatatcctacgacagatttcactgttgat
taacagagcaggaatcaaggacaaactaacggagattggtgatgaagtggtgtga

Protein
Protein IDpfu_aug2.0_235.1_17162.t1
Definition-
>pfu_aug2.0_235.1_17162.t1
MILCEWSTECQPKVSTLEKACSELDRSILTVTPLSKQDTTVLERNMAFLIEEMMEVSLLIPYLTADGILSLLSGKYITDK
KGRSDRIMALLDILSTNERGLDAFISALQKTDQCHISQRLQDSLFLEDFRQHREDTKLKESDLVDVKTSSENIRENKMNS
SSAHSTTVKGIQGTTSEDILRQISLLINRAGIKDKLTEIGDEVV

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