Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_235.1_17165
Locus scaffold235.1 : 391944 ... 403321 : +
To GenomeBrowser scaffold235.1:391944..403321
Genes list of scaffold scaffold235.1
Synonym pfu_aug1.0_9957.1_31856

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_235.1_17165.t1 gi|602655574|ref|XP_007433533.1| PREDICTED: liprin-beta-1-like isoform X6 [Python bivittatus] 6.0e-12
pfu_aug2.0_235.1_17165.t1 gi|733870941|ref|XP_010713845.1| PREDICTED: liprin-beta-1 isoform X10 [Meleagris gallopavo] 8.0e-12

Transcript
Transcript IDpfu_aug2.0_235.1_17165.t1
Definition-
>pfu_aug2.0_235.1_17165.t1
atgctgaagttcgtcaatggatacagtgctgctaacggcaatggatgtgaccgtaggtctggtcagcggcggtcccctaa
ggtagcatttggagatgttgaccattgttatgcagatattacggggaatgacagcagagaacaagcgtcttccagagagt
taagctccccagaggattacctgcctgaatcggtcgattctcagggaattcaggacagaaaatccgtacaagttccggaa
agtggacgaaatatgtccctggacaggaatgacagacacggacagctagcggtcagaaaaagtatgtccgacaaccaaat
cagccacagtgtcacaaacggcagctcgccaagtgggaggagggtagtagactctgtacattatggaattcgtgataagg
attatgtaagttataatgtaggatatagagatgaagaagacgggcacctgccacgggggtatagaaatgagtgttatcta
gcatcacaagtatgtgaatctacgtattatagacaagaaagtcaaaacgggcccactcagtctccggcaaacaggagctc
gacacggccgtacgtatcttacggtgactactgtttgtatacggatcacgagttcctagccaggtatgccctagccaggg
aacgttccctccgacagatggagccaccgcctcctccgtgtggagcagacatggattacgtatctacttccgactcctct
gatgacgtcatctctcaccgggcgcggcctatacggaggagccacagtggtcacgtcatatcacatacaaggacgtactc
ggacagcatgcagagaagcaagagtggacagtttgagtatcgatcggctgtggacaatagtgatatagcgctcaggacgg
gaaaacgaccaaactatctgggaccattgaaccaaactttcagggatttaccagaggatcatagaatgtcacaaaatacg
tcaagtggaccaagtgatatagaggtgcgcaggcgacatcttgatactaaaggaaccaaaaacggtataagacccatcag
tattcacggaaccaatgtgcagtgggaatccaaattaaaagaacttgtggaactgttgacgcgtacgtcactagagacgc
ataaattggacttaatggcagaaatctccagtcttaaaattaaactggcgtcagcagataaagacagaagggacttggat
gatagactacgtatagctcagagacagataaaggagctagaatctcgacttgctgtgagagatgctgaaataacggagct
cagacagcgtcttgtcaggaatggtactgtcgttactcctgattctaatgcttag

Protein
Protein IDpfu_aug2.0_235.1_17165.t1
Definition-
>pfu_aug2.0_235.1_17165.t1
MLKFVNGYSAANGNGCDRRSGQRRSPKVAFGDVDHCYADITGNDSREQASSRELSSPEDYLPESVDSQGIQDRKSVQVPE
SGRNMSLDRNDRHGQLAVRKSMSDNQISHSVTNGSSPSGRRVVDSVHYGIRDKDYVSYNVGYRDEEDGHLPRGYRNECYL
ASQVCESTYYRQESQNGPTQSPANRSSTRPYVSYGDYCLYTDHEFLARYALARERSLRQMEPPPPPCGADMDYVSTSDSS
DDVISHRARPIRRSHSGHVISHTRTYSDSMQRSKSGQFEYRSAVDNSDIALRTGKRPNYLGPLNQTFRDLPEDHRMSQNT
SSGPSDIEVRRRHLDTKGTKNGIRPISIHGTNVQWESKLKELVELLTRTSLETHKLDLMAEISSLKIKLASADKDRRDLD
DRLRIAQRQIKELESRLAVRDAEITELRQRLVRNGTVVTPDSNA

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495