Gene
Gene Model ID | pfu_aug2.0_2351.1_05497 |
---|---|
Locus | scaffold2351.1 : 9472 ... 27375 : - |
To GenomeBrowser | scaffold2351.1:9472..27375 |
Genes list of scaffold | scaffold2351.1 |
Synonym | pfu_aug1.0_19654.1_61931 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
plasminogen- partial | GO:0003824 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_2351.1_05497.t1 | 4 | 1 | Ldl_recept_a | 13 | 48 | 3.2e-27 | 94.1 | 1.0e-11 | 7.7e-08 | 32.1 |
pfu_aug2.0_2351.1_05497.t1 | 4 | 1 | Kringle | 40 | 54 | 1.1e-27 | 95.9 | 1.1 | 8200.0 | -3.1 |
pfu_aug2.0_2351.1_05497.t1 | 4 | 2 | Ldl_recept_a | 50 | 85 | 3.2e-27 | 94.1 | 1.6e-11 | 1.2e-07 | 31.5 |
pfu_aug2.0_2351.1_05497.t1 | 4 | 2 | Kringle | 77 | 87 | 1.1e-27 | 95.9 | 2.0 | 15000.0 | -4.0 |
pfu_aug2.0_2351.1_05497.t1 | 4 | 3 | Ldl_recept_a | 134 | 169 | 3.2e-27 | 94.1 | 1.3e-12 | 9.4e-09 | 35.0 |
pfu_aug2.0_2351.1_05497.t1 | 4 | 3 | Kringle | 180 | 248 | 1.1e-27 | 95.9 | 7.5e-18 | 5.5e-14 | 52.0 |
pfu_aug2.0_2351.1_05497.t1 | 4 | 4 | Kringle | 259 | 327 | 1.1e-27 | 95.9 | 1.9e-19 | 1.4e-15 | 57.0 |
pfu_aug2.0_2351.1_05497.t1 | 4 | 4 | Ldl_recept_a | 325 | 341 | 3.2e-27 | 94.1 | 2.0e-05 | 0.15 | 11.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_2351.1_05497.t1 | gi|542250797|ref|XP_005461555.1| | PREDICTED: plasminogen-like [Oreochromis niloticus] | 2.0e-26 |
pfu_aug2.0_2351.1_05497.t1 | gi|548545935|ref|XP_005754192.1| | PREDICTED: plasminogen-like, partial [Pundamilia nyererei] | 5.0e-26 |
pfu_aug2.0_2351.1_05497.t1 | gi|41393105|ref|NP_958880.1| | plasminogen precursor [Danio rerio] | 4.0e-25 |
pfu_aug2.0_2351.1_05497.t1 | gi|632935031|ref|XP_007887440.1| | PREDICTED: apolipoprotein(a)-like [Callorhinchus milii] | 4.0e-25 |
pfu_aug2.0_2351.1_05497.t1 | gi|498984178|ref|XP_004550726.1| | 4.0e-25 |
Transcript
Transcript ID | pfu_aug2.0_2351.1_05497.t1 |
---|---|
Definition | - |
>pfu_aug2.0_2351.1_05497.t1 atggatagtataggattggctgatgtggataaaaggacatgtgggaagaagcagtaccagtgctttgatgggtcttgcat cggtatcagcaagttctgtgattcaaaccaggactgtccagacaattccgacgaacatgagtgctggacatgtgggaaga agcagtaccagtgctttgatgggtcttgcatcggtatcagcaagttctgtgattcaaaccaggactgtccagacaattcc gacgaacatgagtgctatggcaaattcttggctgcaaacgttacatacgggaaaagcgcaacagttatggagttagaagc aagtttatcgggagcgggtgattttgctcttcttgcaatagatgacgtcaatattgtgaatgatatgtgtccaggtagga cttgctccaacatggaataccagtgcaatgatggattatgtattgatatgggccgattctgtgacttcttccctgactgt gaggaccaatcagatgaaacaaactgcaaaacagactgtcttttgccaaatgataaagtcggcatcaattactacgaaac tcgtagccttactgcatcaggtcaagcatgtatagaatggaaaacggtgtatggaatttttcataattttgagctggtga agaatcttgcaaatgtgtgtaggaacccggatgggcgatccggtccttggtgtttcacagacatgtcgactggatcctgg gaatattgtggtattaaccactgtgcaatggaatgtttggcacctgatgatagatatggaatgaactacaggggagtcat taacaagacaaaatgtggaataccatgtcaacgttgggatacgcagattccacatacacacaagttcaaattgaatggct cggaaaactactgtcggaaccttggagatcatacatatatctggtgttacacaacagatcctgacacacgctgggacgag tgtccgtcattaccacaatgtgatgatgaatggatgtgtaaaagtggacaatgcataccattanctcggatgtga |
Protein
Protein ID | pfu_aug2.0_2351.1_05497.t1 |
---|---|
Definition | - |
>pfu_aug2.0_2351.1_05497.t1 MDSIGLADVDKRTCGKKQYQCFDGSCIGISKFCDSNQDCPDNSDEHECWTCGKKQYQCFDGSCIGISKFCDSNQDCPDNS DEHECYGKFLAANVTYGKSATVMELEASLSGAGDFALLAIDDVNIVNDMCPGRTCSNMEYQCNDGLCIDMGRFCDFFPDC EDQSDETNCKTDCLLPNDKVGINYYETRSLTASGQACIEWKTVYGIFHNFELVKNLANVCRNPDGRSGPWCFTDMSTGSW EYCGINHCAMECLAPDDRYGMNYRGVINKTKCGIPCQRWDTQIPHTHKFKLNGSENYCRNLGDHTYIWCYTTDPDTRWDE CPSLPQCDDEWMCKSGQCIPLXRM |