Gene
| Gene Model ID | pfu_aug2.0_236.1_20461 |
|---|---|
| Locus | scaffold236.1 : 30757 ... 47325 : - |
| To GenomeBrowser | scaffold236.1:30757..47325 |
| Genes list of scaffold | scaffold236.1 |
| Synonym | pfu_aug1.0_3843.1_52100 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_236.1_20461.t4 | 2 | 1 | CH | 13 | 106 | 6.0e-14 | 52.0 | 7.5e-12 | 3.7e-08 | 33.3 |
| pfu_aug2.0_236.1_20461.t4 | 2 | 2 | CH | 128 | 221 | 6.0e-14 | 52.0 | 3.3e-07 | 0.0016 | 18.4 |
Transcript
| Transcript ID | pfu_aug2.0_236.1_20461.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_236.1_20461.t1 atgctggacgttctatggttgatcattttaaattacggaatacacagtatagggcgttcggcggttgaaagaagtgtcgg agttggcaaaaaacttttattagactggtgccaaaaggagttatcagccgatttcgacccacggaatacgctttcataca atttatgtaccggagattggttgctgaagcttctgaagctgtacacagacgtacagacactaccagaggagagaggtgac cagtatcggacattactccaagctactgaggaacagctgggaatcaagcagaatattctcaacccagcagatattgtcga gggaactgttgatgaacacactttgatgatatatgtttctctcctcaaaagaaaagtagggggagaagaacaactagata tcagtgaggatagtttagacagggtttctcctaaaccacctatagcatccccagcatctcccagcttagagaggagaaga agttcaccatctcgtttacatagctctgtggaagcagacgacaattctgaggactggttttcctcatcaaacggatctat caaatcagggagtggtgacccacctgtgtcacaggagggcgagagtttactgattcagacaatcactgaacgtgtgtcgc aacatatcgccatagaacgtgacgatgacgatgatgaagaaagtaatgttagtgttctatctggatctatatcgcaaacc tctgctccaagcaaaagagaggttatagacattgatctgtcctcacaacctcaggaaaaaaatattaaggaattacctca gggaaaagaggcggaacagacaaattctgaaccagacgaggattctactttggttaccactcaggaagaggtagaatcaa aacatacggaggtgcttgaaacggtaccaaaggaagaaaatccgaatttgaagaaaaatttgaaacggaagttattgaaa ataaggaggacagtgaggctactgtattga |
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| Transcript ID | pfu_aug2.0_236.1_20461.t2 |
| Definition | - |
>pfu_aug2.0_236.1_20461.t2 atgctggacgttctatggttgatcattttaaattacggaatacacagtatagggcgttcggcggttgaaagaagtgtcgg agttggcaaaaaacttttattagactggtgccaaaaggagttatcagccgatttcgacccacggaatacgctttcataca atttatgtaccggagattggttgctgaagcttctgaagctgtacacagacgtacagacactaccagaggagagaggtgac cagtatcggacattactccaagctactgaggaacagctgggaatcaagcagaatattctcaacccagcagatattgtcga gggaactgttgatgaacacactttgatgatatatgtttctctcctcaaaagaaaagtagggggagaagaacaactagata tcagtgaggatagtttagacagggtttctcctaaaccacctatagcatccccagcatctcccagcttagagaggagaaga agttcaccatctcgtttacatagctctgtggaagcagacgacaattctgaggactggttttcctcatcaaacggatctat caaatcagggagtggtgacccacctgtgtcacaggagggcgagagtttactgattcagacaatcactgaacgtgtgtcgc aacatatcgccatagaacgtgacgatgacgatgatgaagaaagtaatgttagtgttctatctggatctatatcgcaaacc tctgctccaagcaaaagagaggttatagacattgatctgtcctcacaacctcaggaaaaaaatattaaggaattacctca gggaaaagaggcggaacagacaaattctgaaccagacgaggattctactttggttaccactcaggaagaggtagaatcaa aacatacggaggtgcttgaaacggtaccaaaggaagaaaatccgaatttgaagaaaaatttgaaacggaagttattgaaa ataaggaggacagtgaggctactgtattga |
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| Transcript ID | pfu_aug2.0_236.1_20461.t3 |
| Definition | - |
>pfu_aug2.0_236.1_20461.t3 atgttcatagatggacattccattcatagtttagtttacctgaactgggctaacaccctcctacaggaagtgggcgtggt cgtagaaggaatcacatgtctccaggagggcaaggtcatatgtcaactaattgaccttcttcagcatgaatctgaccttc tcaagaaagcccaggaatcggaatcccagtcggcagaacattacatccagactgccatagctcacatgaaaagacatggg ataagagtcaggtttactgctcaagatatattggatggagacgttaagtctatgctggacgttctatggttgatcatttt aaattacggaatacacagtatagggcgttcggcggttgaaagaagtgtcggagttggcaaaaaacttttattagactggt gccaaaaggagttatcagccgatttcgacccacggaatacgctttcatacaatttatgtaccggagattggttgctgaag cttctgaagctgtacacagacgtacagacactaccagaggagagaggtgaccagtatcggacattactccaagctactga ggaacagctgggaatcaagcagaatattctcaacccagcagatattgtcgagggaactgttgatgaacacactttgatga tatatgtttctctcctcaaaagaaaagtagggggagaagaacaactagatatcagtgaggatagtttagacagggtttct cctaaaccacctatagcatccccagcatctcccagcttagagaggagaagaagttcaccatctcgtttacatagctctgt ggaagcagacgacaattctgaggactggttttcctcatcaaacggatctatcaaatcagggagtggtgacccacctgtgt cacaggagggcgagagtttactgattcagacaatcactgaacgtgtgtcgcaacatatcgccatagaacgtgacgatgac gatgatgaagaaagtaatgttagtgttctatctggatctatatcgcaaacctctgctccaagcaaaagagaggttataga cattgatctgtcctcacaacctcaggaaaaaaatattaaggaattacctcagggaaaagaggcggaacagacaaattctg aaccagacgaggattctactttggttaccactcaggaagaggtagaatcaaaacatacggaggtgcttgaaacggtacca aaggaagaaaatccgaatttgaagaaaaatttgaaacggaagttattgaaaataaggaggacagtgaggctactgtattg a |
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| Transcript ID | pfu_aug2.0_236.1_20461.t4 |
| Definition | - |
>pfu_aug2.0_236.1_20461.t4 atgttcatagatggacattccattcatagtttagtttacctgaactgggctaacaccctcctacaggaagtgggcgtggt cgtagaaggaatcacatgtctccaggagggcaaggtcatatgtcaactaattgaccttcttcagcatgaatctgaccttc tcaagaaagcccaggaatcggaatcccagtcggcagaacattacatccagactgccatagctcacatgaaaagacatggg ataagagtcaggtttactgctcaagatatattggatggagacgttaagtctatgctggacgttctatggttgatcatttt aaattacggaatacacagtatagggcgttcggcggttgaaagaagtgtcggagttggcaaaaaacttttattagactggt gccaaaaggagttatcagccgatttcgacccacggaatacgctttcatacaatttatgtaccggagattggttgctgaag cttctgaagctgtacacagacgtacagacactaccagaggagagaggtgaccagtatcggacattactccaagctactga ggaacagctgggaatcaagcagaatattctcaacccagcagatattgtcgagggaactgttgatgaacacactttgatga tatatgtttctctcctcaaaagaaaagtagggggagaagaacaactagatatcagtgaggatagtttagacagggtttct cctaaaccacctatagcatccccagcatctcccagcttagagaggagaagaagttcaccatctcgtttacatagctctgt ggaagcagacgacaattctgaggactggttttcctcatcaaacggatctatcaaatcagggagtggtgacccacctgtgt cacaggagggcgagagtttactgattcagacaatcactgaacgtgtgtcgcaacatatcgccatagaacgtgacgatgac gatgatgaagaaagtaatgttagtgttctatctggatctatatcgcaaacctctgctccaagcaaaagagaggttataga cattgatctgtcctcacaacctcaggaaaaaaatattaaggaattacctcagggaaaagaggcggaacagacaaattctg aaccagacgaggattctactttggttaccactcaggaagaggtagaatcaaaacatacggaggtgcttgaaacggtacca aaggaagaaaatccgaatttgaagaaaaatttgaaacggaagttattgaaaataaggaggacagtgaggctactgtattg a |
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Protein
| Protein ID | pfu_aug2.0_236.1_20461.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_236.1_20461.t1 MLDVLWLIILNYGIHSIGRSAVERSVGVGKKLLLDWCQKELSADFDPRNTLSYNLCTGDWLLKLLKLYTDVQTLPEERGD QYRTLLQATEEQLGIKQNILNPADIVEGTVDEHTLMIYVSLLKRKVGGEEQLDISEDSLDRVSPKPPIASPASPSLERRR SSPSRLHSSVEADDNSEDWFSSSNGSIKSGSGDPPVSQEGESLLIQTITERVSQHIAIERDDDDDEESNVSVLSGSISQT SAPSKREVIDIDLSSQPQEKNIKELPQGKEAEQTNSEPDEDSTLVTTQEEVESKHTEVLETVPKEENPNLKKNLKRKLLK IRRTVRLLY |
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| Protein ID | pfu_aug2.0_236.1_20461.t2 |
| Definition | - |
>pfu_aug2.0_236.1_20461.t2 MLDVLWLIILNYGIHSIGRSAVERSVGVGKKLLLDWCQKELSADFDPRNTLSYNLCTGDWLLKLLKLYTDVQTLPEERGD QYRTLLQATEEQLGIKQNILNPADIVEGTVDEHTLMIYVSLLKRKVGGEEQLDISEDSLDRVSPKPPIASPASPSLERRR SSPSRLHSSVEADDNSEDWFSSSNGSIKSGSGDPPVSQEGESLLIQTITERVSQHIAIERDDDDDEESNVSVLSGSISQT SAPSKREVIDIDLSSQPQEKNIKELPQGKEAEQTNSEPDEDSTLVTTQEEVESKHTEVLETVPKEENPNLKKNLKRKLLK IRRTVRLLY |
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| Protein ID | pfu_aug2.0_236.1_20461.t3 |
| Definition | - |
>pfu_aug2.0_236.1_20461.t3 MFIDGHSIHSLVYLNWANTLLQEVGVVVEGITCLQEGKVICQLIDLLQHESDLLKKAQESESQSAEHYIQTAIAHMKRHG IRVRFTAQDILDGDVKSMLDVLWLIILNYGIHSIGRSAVERSVGVGKKLLLDWCQKELSADFDPRNTLSYNLCTGDWLLK LLKLYTDVQTLPEERGDQYRTLLQATEEQLGIKQNILNPADIVEGTVDEHTLMIYVSLLKRKVGGEEQLDISEDSLDRVS PKPPIASPASPSLERRRSSPSRLHSSVEADDNSEDWFSSSNGSIKSGSGDPPVSQEGESLLIQTITERVSQHIAIERDDD DDEESNVSVLSGSISQTSAPSKREVIDIDLSSQPQEKNIKELPQGKEAEQTNSEPDEDSTLVTTQEEVESKHTEVLETVP KEENPNLKKNLKRKLLKIRRTVRLLY |
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| Protein ID | pfu_aug2.0_236.1_20461.t4 |
| Definition | - |
>pfu_aug2.0_236.1_20461.t4 MFIDGHSIHSLVYLNWANTLLQEVGVVVEGITCLQEGKVICQLIDLLQHESDLLKKAQESESQSAEHYIQTAIAHMKRHG IRVRFTAQDILDGDVKSMLDVLWLIILNYGIHSIGRSAVERSVGVGKKLLLDWCQKELSADFDPRNTLSYNLCTGDWLLK LLKLYTDVQTLPEERGDQYRTLLQATEEQLGIKQNILNPADIVEGTVDEHTLMIYVSLLKRKVGGEEQLDISEDSLDRVS PKPPIASPASPSLERRRSSPSRLHSSVEADDNSEDWFSSSNGSIKSGSGDPPVSQEGESLLIQTITERVSQHIAIERDDD DDEESNVSVLSGSISQTSAPSKREVIDIDLSSQPQEKNIKELPQGKEAEQTNSEPDEDSTLVTTQEEVESKHTEVLETVP KEENPNLKKNLKRKLLKIRRTVRLLY |
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