Gene
| Gene Model ID | pfu_aug2.0_236.1_20464 |
|---|---|
| Locus | scaffold236.1 : 116372 ... 142895 : - |
| To GenomeBrowser | scaffold236.1:116372..142895 |
| Genes list of scaffold | scaffold236.1 |
| Synonym | pfu_aug1.0_29067.1_33702 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_236.1_20464.t1 | 1 | 1 | SH2 | 348 | 423 | 4.0e-17 | 61.7 | 8.8e-21 | 1.3e-16 | 60.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_236.1_20464.t1 | gi|524886600|ref|XP_005099893.1| | PREDICTED: SH2 domain-containing protein 4B-like isoform X4 [Aplysia californica] | 0.0 |
| pfu_aug2.0_236.1_20464.t1 | gi|524886594|ref|XP_005099890.1| | PREDICTED: SH2 domain-containing protein 4B-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_236.1_20464.t1 | gi|591385764|ref|XP_007067307.1| | PREDICTED: SH2 domain-containing protein 4B isoform X2 [Chelonia mydas] | 0.0 |
| pfu_aug2.0_236.1_20464.t1 | gi|591385762|ref|XP_007067306.1| | PREDICTED: SH2 domain-containing protein 4B isoform X1 [Chelonia mydas] | 0.0 |
| pfu_aug2.0_236.1_20464.t1 | gi|637327579|ref|XP_008114015.1| | PREDICTED: SH2 domain-containing protein 4B isoform X1 [Anolis carolinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_236.1_20464.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_236.1_20464.t1 atgctacaacaaattctacaggacatgtatgtggacccagagctcctggccgagctgtctgatgaacagaaacacctact ttttgtcaagatgagagaggaacaagtcagaagatggaaagaaagagaagataaactcgaagaagaagagaagaagaaac caaggaaacttaatcataaaaaatgtaataagaatgtggggtttctgtccgggacagatggaaaggagtgggtatgggtg atgggagaacataaaaatgacatgacaatagaacagatccttgagacagaagcccttagaaaagctgagcaggaggcaga aaatgaactcgaggaattaaggaaaagagaggaagtggatttaaaaaagaagatggcagaagagcaacataaaattgaag aagaacaaaagcgtgctgcagaagacttaaaacgaaaagaagaagaagcagctctttatcaatcaatcaaagaggccagg gaggcagcaagaaaagctgaagaggaaaaacggaaatctgtggaaaaggaaaggataaggattgagcaactcaggtcatc taatggattacacatattcatggaaaagtttgcctctgagaagaggaaatccttagaacgattacaaaaggataaaaata gacgaagcagtgaaatcttcatcaaaatccaagagggccgaaaaaagatggagaaggtggcagaggaacatagtcatgaa ctagatgaaaattttaaagaacaagagaaaaaggcaaaagaagcacaaaatcaaatacagaatcttgcccgtaaagcaag gatagagtataaaaactctatgagagctacagcaaatgtgatgtctgctgcaaacgctttcagaaaagggaacaaacctc ctctccctccaaaaaatatggacaaagttccagcaaatttgatcaaaaagccgaagcgacctcctcgacccccaaatcga caggctgtgatagaatggtttctggaggaggagagaccaaggggatcaggggtagaatcggagacaggaaaaatctgctc gtggttccatggagtgatttcaaggacggatgcagagcatatcttaatcaatcaaagcgtaggcagctttttagtgcggg ttagtgaacgtgtgtggggatatacaatatcttatcgtgccgatgacagatgtaaacattttcttgtggacacttctgaa gatggttatcaattctttggtgcaaatcaagtgcaacataaaagcttagaggacttaattaactttcataagaaaaacct catcacagctataggagaagaaaaactattaaatcccgtcggtcagcagaaagaacctcccgattatcaagaactgatgc agcctagagttactcagtctacgaaaatctga |
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Protein
| Protein ID | pfu_aug2.0_236.1_20464.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_236.1_20464.t1 MLQQILQDMYVDPELLAELSDEQKHLLFVKMREEQVRRWKEREDKLEEEEKKKPRKLNHKKCNKNVGFLSGTDGKEWVWV MGEHKNDMTIEQILETEALRKAEQEAENELEELRKREEVDLKKKMAEEQHKIEEEQKRAAEDLKRKEEEAALYQSIKEAR EAARKAEEEKRKSVEKERIRIEQLRSSNGLHIFMEKFASEKRKSLERLQKDKNRRSSEIFIKIQEGRKKMEKVAEEHSHE LDENFKEQEKKAKEAQNQIQNLARKARIEYKNSMRATANVMSAANAFRKGNKPPLPPKNMDKVPANLIKKPKRPPRPPNR QAVIEWFLEEERPRGSGVESETGKICSWFHGVISRTDAEHILINQSVGSFLVRVSERVWGYTISYRADDRCKHFLVDTSE DGYQFFGANQVQHKSLEDLINFHKKNLITAIGEEKLLNPVGQQKEPPDYQELMQPRVTQSTKI |
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