Gene
| Gene Model ID | pfu_aug2.0_236.1_20466 |
|---|---|
| Locus | scaffold236.1 : 156370 ... 160925 : - |
| To GenomeBrowser | scaffold236.1:156370..160925 |
| Genes list of scaffold | scaffold236.1 |
| Synonym | pfu_aug1.0_1623.1_44076 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uncharacterized protein loc105208675 | GO:0016301 GO:0016310 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_236.1_20466.t1 | 3 | 1 | CDK2AP | 32 | 63 | 0.0 | 175.1 | 0.61 | 610.0 | 0.5 |
| pfu_aug2.0_236.1_20466.t1 | 3 | 2 | CDK2AP | 65 | 119 | 0.0 | 175.1 | 2.1e-24 | 2.1e-21 | 77.0 |
| pfu_aug2.0_236.1_20466.t1 | 3 | 3 | CDK2AP | 165 | 235 | 0.0 | 175.1 | 6.2e-32 | 6.1e-29 | 101.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_236.1_20466.t1 | gi|524897359|ref|XP_005105142.1| | PREDICTED: cyclin-dependent kinase 2-associated protein 2-like isoform X1 [Aplysia californica] | 3.0e-29 |
| pfu_aug2.0_236.1_20466.t1 | gi|676480711|ref|XP_009062148.1| | hypothetical protein LOTGIDRAFT_99981, partial [Lottia gigantea] | 1.0e-27 |
| pfu_aug2.0_236.1_20466.t1 | gi|642933391|ref|XP_008197397.1| | PREDICTED: cyclin-dependent kinase 2-associated protein 1 [Tribolium castaneum] | 4.0e-26 |
| pfu_aug2.0_236.1_20466.t1 | gi|260785094|ref|XP_002587598.1| | hypothetical protein BRAFLDRAFT_230475 [Branchiostoma floridae] | 2.0e-24 |
| pfu_aug2.0_236.1_20466.t1 | gi|157111043|ref|XP_001651366.1| | AAEL005713-PA [Aedes aegypti] | 2.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_236.1_20466.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_236.1_20466.t1 atggaagaagagggatcaaatacacctaaggagctgagccgtgtgaattctccagctatcggtaaccctgggacacccag aggggctgatcaagaagtccgagccacaccacctctggcaatgaggcaaatgccgcagcaactgaatcctcaacaaattc aacaattacagcagcaacatttacagcaactagcacaatcgcaacatttgttgtctcagcaacctgcacagagtaaatac tcgcagcttctagcagtgatcgaggatatgggacgggacattcggcctacttacgctggaagcaaaacctccgcggagag actgaagaggggaattgttcactcgaggattctggtgccgcnggctatcggtaaccctgggacacccagaggggctgatc aagaagtccgagccacgccacctctggcaatgaggcaaatgcctcagcaactgaatcctcaacaaattcaacaattacaa cagcagcatttacagcaactagcacaatcgcaacatttgttgtctcagcaacctgcacagagtaaatactcgcaacttct agcagtgatcgaggatatgggacgggacattcggcctacttacgctggaagcaaaacctccgcggagagactgaagaggg gaattgttcactcgaggattctggtcagagagtgtttgatggaatgcgagagaagtgccagaacttga |
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Protein
| Protein ID | pfu_aug2.0_236.1_20466.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_236.1_20466.t1 MEEEGSNTPKELSRVNSPAIGNPGTPRGADQEVRATPPLAMRQMPQQLNPQQIQQLQQQHLQQLAQSQHLLSQQPAQSKY SQLLAVIEDMGRDIRPTYAGSKTSAERLKRGIVHSRILVPXAIGNPGTPRGADQEVRATPPLAMRQMPQQLNPQQIQQLQ QQHLQQLAQSQHLLSQQPAQSKYSQLLAVIEDMGRDIRPTYAGSKTSAERLKRGIVHSRILVRECLMECERSART |
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