Gene
| Gene Model ID | pfu_aug2.0_236.1_20467 |
|---|---|
| Locus | scaffold236.1 : 161036 ... 172610 : + |
| To GenomeBrowser | scaffold236.1:161036..172610 |
| Genes list of scaffold | scaffold236.1 |
| Synonym | pfu_aug1.0_1623.1_44077 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| golgi to er traffic protein 4 homolog isoform x1 | GO:0071816 GO:0071818 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_236.1_20467.t2 | 1 | 1 | DUF410 | 8 | 250 | 0.0 | 248.4 | 0.0 | 0.0 | 248.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_236.1_20467.t2 | gi|514748332|ref|XP_005020128.1| | PREDICTED: Golgi to ER traffic protein 4 homolog isoform X3 [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_236.1_20467.t2 | gi|514748324|ref|XP_005020126.1| | PREDICTED: Golgi to ER traffic protein 4 homolog isoform X1 [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_236.1_20467.t2 | gi|527254097|ref|XP_005145335.1| | PREDICTED: Golgi to ER traffic protein 4 homolog [Melopsittacus undulatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_236.1_20467.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_236.1_20467.t1 atgtcgggccgaagtggtggtgtggatcgagttttagcaaaatgtcaagcttgtgtagatgctggaaactattatgaagc acatcagatgtatagaacgttatattttaggtacaaaggccagaagaagtatccagaagctatcaatctgttatacaatg gtgcccttttactccttaatcataatcaacatcagagtggcacagatctagctttactgctggtagacctcctgaaccag tcgatgactcaagttacagaggaattagttgaaaagatcggaacactattccgaagtatggattgtacaaatcctgacag acataattttatggtatcagcagtgaggtggtcaatgaaggttgacaaccagcatactcgagggcatccagagcttcaca aggctttcggcactttcttttggcgagagaagaattacattcaggccaggtaccatttcctgcattccacagacggaagg agttgtgcgaccatgctgatagaataccatacaaactttgggtatccctcggaagttgatctatttatagctcaggctgt tttgcaatatttatgtttacaaaacaaagagacggcaagggtggtatttgtcacttataccaaggaacatcctgatgtca cggacgggcctccatacgtcactcctctcctaaactttatatggttcttactcttagcattggaaggtgggagagtcact gttttttcaatactttgtgaaaaataccagacgtcaattagcagagatcctagttataaagagtaccttgacaaaatagg gcagctgttctttggtcttcctcctccaaagaaacaaaaccagggactgttcggtaacctccttcaaagtttactcggag aagacgacgattctatgcaacagtctacatcatcaagtttacctagtagccatagtcaggacttatctaatgtggaatta gactga |
|
| Transcript ID | pfu_aug2.0_236.1_20467.t2 |
| Definition | - |
>pfu_aug2.0_236.1_20467.t2 atgccctccaggtacaaaggccagaagaagtatccagaagctatcaatctgttatacaatggtgcccttttactccttaa tcataatcaacatcagagtggcacagatctagctttactgctggtagacctcctgaaccagtcgatgactcaagttacag aggaattagttgaaaagatcggaacactattccgaagtatggattgtacaaatcctgacagacataattttatggtatca gcagtgaggtggtcaatgaaggttgacaaccagcatactcgagggcatccagagcttcacaaggctttcggcactttctt ttggcgagagaagaattacattcaggccaggtaccatttcctgcattccacagacggaaggagttgtgcgaccatgctga tagaataccatacaaactttgggtatccctcggaagttgatctatttatagctcaggctgttttgcaatatttatgttta caaaacaaagagacggcaagggtggtatttgtcacttataccaaggaacatcctgatgtcacggacgggcctccatacgt cactcctctcctaaactttatatggttcttactcttagcattggaaggtgggagagtcactgttttttcaatactttgtg aaaaataccagacgtcaattagcagagatcctagttataaagagtaccttgacaaaatagggcagctgttctttggtctt cctcctccaaagaaacaaaaccagggactgttcgataaagcagtcaagaagtcctaa |
|
Protein
| Protein ID | pfu_aug2.0_236.1_20467.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_236.1_20467.t1 MSGRSGGVDRVLAKCQACVDAGNYYEAHQMYRTLYFRYKGQKKYPEAINLLYNGALLLLNHNQHQSGTDLALLLVDLLNQ SMTQVTEELVEKIGTLFRSMDCTNPDRHNFMVSAVRWSMKVDNQHTRGHPELHKAFGTFFWREKNYIQARYHFLHSTDGR SCATMLIEYHTNFGYPSEVDLFIAQAVLQYLCLQNKETARVVFVTYTKEHPDVTDGPPYVTPLLNFIWFLLLALEGGRVT VFSILCEKYQTSISRDPSYKEYLDKIGQLFFGLPPPKKQNQGLFGNLLQSLLGEDDDSMQQSTSSSLPSSHSQDLSNVEL D |
|
| Protein ID | pfu_aug2.0_236.1_20467.t2 |
| Definition | - |
>pfu_aug2.0_236.1_20467.t2 MPSRYKGQKKYPEAINLLYNGALLLLNHNQHQSGTDLALLLVDLLNQSMTQVTEELVEKIGTLFRSMDCTNPDRHNFMVS AVRWSMKVDNQHTRGHPELHKAFGTFFWREKNYIQARYHFLHSTDGRSCATMLIEYHTNFGYPSEVDLFIAQAVLQYLCL QNKETARVVFVTYTKEHPDVTDGPPYVTPLLNFIWFLLLALEGGRVTVFSILCEKYQTSISRDPSYKEYLDKIGQLFFGL PPPKKQNQGLFDKAVKKS |
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