Gene
| Gene Model ID | pfu_aug2.0_236.1_20468 |
|---|---|
| Locus | scaffold236.1 : 217761 ... 229159 : + |
| To GenomeBrowser | scaffold236.1:217761..229159 |
| Genes list of scaffold | scaffold236.1 |
| Synonym | pfu_aug1.0_1623.1_44078 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_236.1_20468.t1 | 1 | 1 | Homeobox | 123 | 179 | 2.6e-23 | 81.3 | 1.6e-26 | 7.9e-23 | 79.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_236.1_20468.t1 | gi|524871543|ref|XP_005092544.1| | PREDICTED: dual specificity protein kinase splA-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_236.1_20468.t1 | gi|742113192|ref|XP_010872903.1| | PREDICTED: homeobox protein unc-4 homolog [Esox lucius] | 0.0 |
| pfu_aug2.0_236.1_20468.t1 | gi|736309271|ref|XP_010795505.1| | PREDICTED: homeobox protein unc-4 homolog [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_236.1_20468.t1 | gi|734603723|ref|XP_010728884.1| | PREDICTED: homeobox protein unc-4 homolog [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_236.1_20468.t1 | gi|528474893|ref|XP_005164261.1| | PREDICTED: homeobox protein unc-4 homolog [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_236.1_20468.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_236.1_20468.t1 atgttaacgtatagcgaacggcaagttaatgaacgtagaaatatgagtaccggtacccttggtttgttggacgctcgtta tcaacatggatacggaatgttatcttcccttgctgggtatgcagcccattttgggggtccctttgccgctctaggttttg cctccaccgtggggaacccatataatattgactatagtgcacaccatgggggtcacggggcctttacaatggatggactc ctcccaaacgcatcctctcgaggtctttcagcatcccaagttttgtcaagtccaactggaaaggagagaaatattcattc tccagacaaaagtgacgatgaccgagagagtgcagcagcaaagcgacgccgaaccaggaccaattttacaggatggcagc tcgaggagcttgagagggccttccaagacagccactatccagacgtattcatgagggaggcgctggcactgcgactcgac cttgtagaatccagagtacaggtctggtttcaaaacaggagggcaaagtggcgaaagaaggaaaacacgaaaaaaggccc cggtcgtccggctcataatgcccatccgcaaacatgcagcggtgaaccgatggatccagaagaaatcaaaaagcgcgaaa tacagaggcaagaaaagaagagaaggaagcaggaagaaaggctgaagaaattagaagaaagaaggaaaaatctgcaagag caaaaacatcaagactttagaatatccgaatgttcgtcgtcgtctagagtgctatctgatgatgatagagagtcccatta tagtgacgcggcagactctgacacgagttctcataatgtaagcagtggtaataatgacagctttaatatagaggagggca acagaaggtgctcattcagtatagacagtttattagaagcatcaaaagtcccgcgcggaaggagaccgaattccaaatat cctcgtgtgcaagctagtaaatcagttagtgctcttggactgggtatgatgcccctctttcccatcacacaacctgtagg cttcatcgtggaacaaagatcgcggtccccattgtcagacgataacatttctgtaacgtcagaggaaattcacgacaaaa ccggaagtgacatagaggaagacaccaatattgacgttgaatcgagtgacagtgaagatgatgaaaaatcccacaaaagc cacagtcccacagaaatcgaacagaatcaatacaaaaactga |
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Protein
| Protein ID | pfu_aug2.0_236.1_20468.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_236.1_20468.t1 MLTYSERQVNERRNMSTGTLGLLDARYQHGYGMLSSLAGYAAHFGGPFAALGFASTVGNPYNIDYSAHHGGHGAFTMDGL LPNASSRGLSASQVLSSPTGKERNIHSPDKSDDDRESAAAKRRRTRTNFTGWQLEELERAFQDSHYPDVFMREALALRLD LVESRVQVWFQNRRAKWRKKENTKKGPGRPAHNAHPQTCSGEPMDPEEIKKREIQRQEKKRRKQEERLKKLEERRKNLQE QKHQDFRISECSSSSRVLSDDDRESHYSDAADSDTSSHNVSSGNNDSFNIEEGNRRCSFSIDSLLEASKVPRGRRPNSKY PRVQASKSVSALGLGMMPLFPITQPVGFIVEQRSRSPLSDDNISVTSEEIHDKTGSDIEEDTNIDVESSDSEDDEKSHKS HSPTEIEQNQYKN |
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