Gene
| Gene Model ID | pfu_aug2.0_236.1_20474 |
|---|---|
| Locus | scaffold236.1 : 393748 ... 404522 : - |
| To GenomeBrowser | scaffold236.1:393748..404522 |
| Genes list of scaffold | scaffold236.1 |
| Synonym | pfu_aug1.0_3993.1_37770 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_236.1_20474.t1 | 2 | 1 | PID | 49 | 71 | 1.9e-06 | 27.8 | 0.18 | 2600.0 | -1.8 |
| pfu_aug2.0_236.1_20474.t1 | 2 | 2 | PID | 112 | 213 | 1.9e-06 | 27.8 | 4.4e-10 | 6.5e-06 | 26.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_236.1_20474.t1 | gi|524892141|ref|XP_005102601.1| | PREDICTED: uncharacterized protein LOC101860264 [Aplysia californica] | 1.0e-39 |
| pfu_aug2.0_236.1_20474.t1 | gi|676437011|ref|XP_009048065.1| | hypothetical protein LOTGIDRAFT_230701 [Lottia gigantea] | 5.0e-35 |
| pfu_aug2.0_236.1_20474.t1 | gi|260836393|ref|XP_002613190.1| | hypothetical protein BRAFLDRAFT_120281 [Branchiostoma floridae] | 2.0e-25 |
| pfu_aug2.0_236.1_20474.t1 | gi|260836391|ref|XP_002613189.1| | hypothetical protein BRAFLDRAFT_120280 [Branchiostoma floridae] | 2.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_236.1_20474.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_236.1_20474.t1 atgccagctttcttgactcaacatggtccttgcctaactgccagtggttacctgttggtggtgaaggtggagccagggag tgtggcggaggaagatatgttagatgcagaaaggaacatttacaaacccatactacagttggccagggaggctgatatta acatagatctgatattatcaaagagagatctggataacttaaaggaggcagacaccaagaaacctcctcatgccctcctc cccgaggaagaggaagaggaagtacctgtccatggctcagaaggagggcaagtatttacatgtattttcagctatgagtt tgccagagctgtttatgaagcaaaatatctaggatatgcaaatcttggcaaggatggaagagtagaaaggatagaagatt ctgtagccactgtattgaggaatctcaaggaaagaattactgtgagaatagatctacatgaaaaagatgttctagtgtac aacctacaagaaaataaggtacttttcaagcacacatatacagaaatttcggcttgtgggaggaggacagatgcccttag atatataggatatattgctggagagacaacctgtagtttagcatcagatttcaaatgtcatgtgtatgaagctatgacag atgaggagctcagggctttgagagaacacatcttttgttatagactgtag |
|
Protein
| Protein ID | pfu_aug2.0_236.1_20474.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_236.1_20474.t1 MPAFLTQHGPCLTASGYLLVVKVEPGSVAEEDMLDAERNIYKPILQLAREADINIDLILSKRDLDNLKEADTKKPPHALL PEEEEEEVPVHGSEGGQVFTCIFSYEFARAVYEAKYLGYANLGKDGRVERIEDSVATVLRNLKERITVRIDLHEKDVLVY NLQENKVLFKHTYTEISACGRRTDALRYIGYIAGETTCSLASDFKCHVYEAMTDEELRALREHIFCYRL |
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