Gene
| Gene Model ID | pfu_aug2.0_2361.1_05499 |
|---|---|
| Locus | scaffold2361.1 : 1296 ... 15587 : + |
| To GenomeBrowser | scaffold2361.1:1296..15587 |
| Genes list of scaffold | scaffold2361.1 |
| Synonym | pfu_aug1.0_24773.1_04398 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2361.1_05499.t1 | 2 | 1 | Cpn60_TCP1 | 15 | 111 | 4.0e-18 | 65.3 | 3.5e-09 | 5.2e-05 | 22.0 |
| pfu_aug2.0_2361.1_05499.t1 | 2 | 2 | Cpn60_TCP1 | 630 | 1045 | 4.0e-18 | 65.3 | 4.0e-13 | 5.9e-09 | 35.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2361.1_05499.t1 | gi|676441513|ref|XP_009049518.1| | hypothetical protein LOTGIDRAFT_238707 [Lottia gigantea] | 2.0e-17 |
| pfu_aug2.0_2361.1_05499.t1 | gi|524871934|ref|XP_005092737.1| | PREDICTED: uncharacterized protein LOC101863491 [Aplysia californica] | 5.0e-12 |
| pfu_aug2.0_2361.1_05499.t1 | gi|597731991|ref|XP_007228351.1| | PREDICTED: Bardet-Biedl syndrome 12 protein [Astyanax mexicanus] | 1.0e-11 |
| pfu_aug2.0_2361.1_05499.t1 | gi|260828424|ref|XP_002609163.1| | hypothetical protein BRAFLDRAFT_92547 [Branchiostoma floridae] | 4.0e-10 |
| pfu_aug2.0_2361.1_05499.t1 | gi|390349253|ref|XP_003727176.1| | 2.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_2361.1_05499.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2361.1_05499.t1 atggacaggtgtaaaattggtattgaaaatggcatccagtgtttggtggatgacaatgatgtggcgtatattacagatac cataaccttacttcagtctttagatttaaaacaccctgtggatcagtacgtactgtctgtctgtcagtcattccatcaga gccatcataacggagtgaagatgttactgtatatgatacaggccttgatgaaagcagcctctatactgaaagaacagggt gtaccgttaagttatatcaggagacacatgtgtgaaggtatagatatatctagtgaacatgccgatgccatcaaaatacc tatccagcttgaacaaaatgttggaaagaaggccagagaaccagttattctgcagaaaaataataatacagaggataaac aaccaaagaatctccataaagatcacagaaatatgacatttgaatctcaacagccaattataaaccttgaaatgagagag aaaaccacaaaatatcacagtaatgactttgatgatgaagaggatgatgacgatgatattagctggttttttgaaagcga tgatttattagggggaaaaactgatgataatttacctaccaacacatccaaaacattatcaataaatcatatgaaaacag aggatgatgtgacaattacgtctcttaggcaaaattcagacacagactcagattttgacgattgttttgagggaattcct gcgtatagtaaggttatagatggaacgtctgccaaacatacctcatctaatagcagggaatctacacgcttatcttatat tacaggcagtgcaaaggaacaactaacagagaacggcaagtatgacacgtctgcagaaatggctcgagataacggcaaaa catttgacgccgcatcaagtactctcaacacagatgctctgtttgacaaaaatgtaggagaaatttcagaaacaatagtt aaaggggattttgtcagtgatgaagacaaaaagcaaaatttgatggatttgattgcaaacagactcaagcataagaaatt gacaatgtctaaaacagttttaaacagaagtagatatttcaaaacggtgacttcgacagtcgaggaacttaatcaaggaa attcatctgaagccgcagaacttaatgaaatggaatcagaaggaaaaagaaacatttcattagctgagagaaacatgcac gatgattctgaatttgttatcgaagaggtgtctttaacggtaggggaaattaatcaagaaaaaacatttgaagcctctga acttaatgaaattgaatcagtaagagaaagaaaaatttcattagcagagagaaaccgagaagaaggaaattcagaattta ttgatagaacaatgggtaaagacacaataggagaggatccaaaaatcaagaaacatggatctgaagagtcaagtgactca ttgttgagtaatggtcaagagtcaagtgactctttgttgagtaatcatgaaaaatctagtgactcattgttgattagtgg aaatcatgatttacggacagctaaagaattgcaaaatgtcttaaaccaaaagctgatgaaagccggtaagcagagaatgt caaatgttcttctgaatagcagacactataaaactatggatgattgtgttctaggtggaacagcttcagagagcaatggt gattcagaggaaaaagagatcttgtctcatgatgcagaatttccagacgaagacggctttagttcaacagattcaaacga taagatagaaacgaaaagcccgataacaacaggggataagtgtggagattgtaatgatagaatagagaaaagatttggcg attccataagtctgagtgaggcagtgcatggtttgtgtaggggtaaaaagatagtagctgaattgatactggaagcggtc agtcatcaaaatgaagatgctggtcacagtaggattcaatttgatgcaaacagagttatctgcctttgtatgagtgggtc tcaccttaaaccaccgactctgatccaggggttaacactggtaaatggagatctgaggatgtcattccatcacaaaggtt acaaagacacactgacagccacaacagtgtataatccaggggaatacacagacagacagacagcagagggggcgtggcta gatcagctgattgatacacatactcaggttccctatgatgtcctcctatgtaagggtggtatagacgaccgtgccaggag cttactggagagtcagaggatcatctgtatagagagcgtgtcatacagatctctactctcattggctgtctcacatcatg tcaccatggtaacatatatggaggaaatatcagaggatcacatattgagggacatcacattgacacctctgtataataac tggagtctgtattcttcaccaaatcatcctgtaatcatagaatcctcctatcagatactccagactgctatttacaacca cccgtgtgagattggtcgtgctaagtttgagacagactttctacgtgccctgtacgtggtacagtcaagtatccagactg gctatgttataccaggagagggacagacagaacaaagctgttaccaaaaactgatccaggagtctggtaaatttaacttt catttagttgatttagtttgctatatcatagatatccatagcattatttcttttccagtaacttgtatgcagaccaattc ctaccgatcagtaattttacagcaactggcagatgtcatgttgacctactttaacacagtacaaagcaacgccaaggcca tccagaattcaatagcaggtttccatgatctgacaaaggatggaaattgtagcactaaatgccaagacgaaaaagaaaat aactctatgcaagttttaatagagcaggatagtgataaacaatttacacagtctttcagtaacgttaaaaatactcttta caatggtaaaatcttatatccttcaacgagtgatgatgggtacattgacaatcaagatgcttcagtatcaaaatgtaaag gtcaaggtcatcttgacaatgtgtcatcgaagacagcggcttggagaacagctttcgaaaccatgacaaccataatgtta actgatgtgcatataatcacaggaaacgataaaagtgaaagaaaaatggagacattgtttgcaaataaagttattttata a |
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Protein
| Protein ID | pfu_aug2.0_2361.1_05499.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2361.1_05499.t1 MDRCKIGIENGIQCLVDDNDVAYITDTITLLQSLDLKHPVDQYVLSVCQSFHQSHHNGVKMLLYMIQALMKAASILKEQG VPLSYIRRHMCEGIDISSEHADAIKIPIQLEQNVGKKAREPVILQKNNNTEDKQPKNLHKDHRNMTFESQQPIINLEMRE KTTKYHSNDFDDEEDDDDDISWFFESDDLLGGKTDDNLPTNTSKTLSINHMKTEDDVTITSLRQNSDTDSDFDDCFEGIP AYSKVIDGTSAKHTSSNSRESTRLSYITGSAKEQLTENGKYDTSAEMARDNGKTFDAASSTLNTDALFDKNVGEISETIV KGDFVSDEDKKQNLMDLIANRLKHKKLTMSKTVLNRSRYFKTVTSTVEELNQGNSSEAAELNEMESEGKRNISLAERNMH DDSEFVIEEVSLTVGEINQEKTFEASELNEIESVRERKISLAERNREEGNSEFIDRTMGKDTIGEDPKIKKHGSEESSDS LLSNGQESSDSLLSNHEKSSDSLLISGNHDLRTAKELQNVLNQKLMKAGKQRMSNVLLNSRHYKTMDDCVLGGTASESNG DSEEKEILSHDAEFPDEDGFSSTDSNDKIETKSPITTGDKCGDCNDRIEKRFGDSISLSEAVHGLCRGKKIVAELILEAV SHQNEDAGHSRIQFDANRVICLCMSGSHLKPPTLIQGLTLVNGDLRMSFHHKGYKDTLTATTVYNPGEYTDRQTAEGAWL DQLIDTHTQVPYDVLLCKGGIDDRARSLLESQRIICIESVSYRSLLSLAVSHHVTMVTYMEEISEDHILRDITLTPLYNN WSLYSSPNHPVIIESSYQILQTAIYNHPCEIGRAKFETDFLRALYVVQSSIQTGYVIPGEGQTEQSCYQKLIQESGKFNF HLVDLVCYIIDIHSIISFPVTCMQTNSYRSVILQQLADVMLTYFNTVQSNAKAIQNSIAGFHDLTKDGNCSTKCQDEKEN NSMQVLIEQDSDKQFTQSFSNVKNTLYNGKILYPSTSDDGYIDNQDASVSKCKGQGHLDNVSSKTAAWRTAFETMTTIML TDVHIITGNDKSERKMETLFANKVIL |
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