Gene
| Gene Model ID | pfu_aug2.0_2366.1_22042 |
|---|---|
| Locus | scaffold2366.1 : 13996 ... 65783 : + |
| To GenomeBrowser | scaffold2366.1:13996..65783 |
| Genes list of scaffold | scaffold2366.1 |
| Synonym | pfu_aug1.0_31537.1_70019 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2366.1_22042.t1 | 3 | 1 | FAST_1 | 395 | 414 | 5.4e-08 | 32.4 | 0.82 | 4000.0 | -2.5 |
| pfu_aug2.0_2366.1_22042.t1 | 3 | 2 | FAST_1 | 525 | 592 | 5.4e-08 | 32.4 | 1.6e-05 | 0.08 | 12.6 |
| pfu_aug2.0_2366.1_22042.t1 | 3 | 3 | FAST_1 | 637 | 676 | 5.4e-08 | 32.4 | 1.5e-07 | 0.00072 | 19.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2366.1_22042.t1 | gi|383859016|ref|XP_003704994.1| | PREDICTED: protein TBRG4 [Megachile rotundata] | 3.0e-19 |
| pfu_aug2.0_2366.1_22042.t1 | gi|350419514|ref|XP_003492209.1| | 1.0e-16 | |
| pfu_aug2.0_2366.1_22042.t1 | gi|328707257|ref|XP_001950421.2| | PREDICTED: protein TBRG4 [Acyrthosiphon pisum] | 4.0e-15 |
| pfu_aug2.0_2366.1_22042.t1 | gi|571523832|ref|XP_006562739.1| | PREDICTED: protein TBRG4-like isoform X1 [Apis mellifera] | 1.0e-13 |
| pfu_aug2.0_2366.1_22042.t1 | gi|403278497|ref|XP_003930839.1| | PREDICTED: protein TBRG4 isoform X1 [Saimiri boliviensis boliviensis] | 1.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_2366.1_22042.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2366.1_22042.t1 atgtctagaatccagctcttgacagtatttgccagagggcaccatgggtcgttgccatggaaatgcaaaacacgtttcat gaagagatcgaccacaaatcatgctttgtcacgatctgtgacctcaggttctgagaaggaaaaaattgaagctcaaacaa acaatgtggaggagtctgcagcattgcttgatgaggatggaagcaagccagcctcggacaaatccacggagaatgtcaga atgaaggtacaagctgaggataaacggaaatacatcaagagcaacatctttaaaatcttgagaaagcctgaacatgttga aaaactatcagaactaaaggagatggatagtgctgagtcggaagagaagttggtaggattagatcaactacaaaagacat cagagaaagaggagaagtcaaaagaaaaaatgggtttagagttaggatcgataagattagacttaaaaaggaatatagga gcagtaaaaaaaactgctacattgttcgaagaggaaataaataagtcaactatgaagtacagtgattatatatctgacgt cctccttcacaccaaagatcaacctaagagcaaaggactcgataagctggaggcaattctcaacaaacagaatggtccta atgttgtacaggagaaagaatccttgcagatacaggaggataagataagtgatgatgacaatgaaaagatatctgacgtc agtcttcaagcagagaccaagccacaggatgaaatcaaatatgatttacagtcaaaaatgagacctcccatggtgactga tcgtccaaaaccaagtgatgatctgtcagagagattaagtgttgctgaacatacgactgttccaaagaaatcaaaacaga agaaagaggttgctaggccaccattggttcgtcctattccagaaattttggattctataaaatgttctgaaaacatggag gaatgtgtacaggcacttaataacatttcatggtcgtacaaaaacacaacttctgtagatccggagatgttaaaagctat agaacaatcaccaaagttagcatacattttgaataaatcgatacagtcgctgaagtcaaataccatggaaacatatggac tggcaaaagtgttcatagccatctcagtgctgccatttgtggataccgacagtaaaactctggtagccaatgaagtgaaa gagaaaatgtcacatttccatctctcaaaattgctcaacttctatgctaccatcgagtcacagtctgatttgtcatggtt gccagtaaagttcgtagaagatatgaaaaaagctttacagtttgcttggttggatatctccaatgcagagcagttggcaa aatttcttaagatttttacacgcccagaccctaaattcattcctaaactggaatcgaaaatcttggatttcattgatgac atgtccctaagggagataattgaagttttaaaattcttggaaagaagcggtaatcgagatatgaagatactaagatactg cgcccacaatctgcagaaacctgacatacatgtagcaagaataagtgagataagagacatcctatattgttttagtcgat tgaacttcatgcaagaaaacattttgaaaactctcgctgagaaacttgtgagtggtttgaaaacagacagtttttcctac catacaacaaatgtgctgaagactcttgattccataaatcattcttttgccagcttacgttactatgacaagcgttttat atctatagtattgaaccacttgaatagtacaaattctcagataagtcagaagcaggctgctagcttcctgtttgcgtttg caaagagtggaatttctctgagccataaatccacaatgcagaaactggtcgacgttgctaccaaaaatagccaaatgaga gatcattcacctgtagcctggttgaggttggtctggagtacatgtgtacttgcagtaggatcggaggaacttgtatcggg tgtgcttgataagtactttgtaaatcaagtagtaggagggaagaacaagaccaatcatctaatgctgcggaatatagata gctatgctaaacactgcatagaaaactaccgtggaaatagacttactgaccaagtggaaccactagatcagcaacatcag gtaggggaaaaatgtgtcgagacttttgaagaatcatcaggtgttcaattgagagaattcaggagtgtgatacagagaat ggctccagatgagagctatgttgagattggcaagaggtttcctgaaggttttactatcgatgcagttgtctgcttagatg attttggtaaaatacaatcgccgtcagtaaaggggactcgcagggtggccatcaagtatttgacattctacgagaccctt atgcctgttggtgcaccaaatggagcctccaaactaatgagaaaccaactgaacaagatgggctatcgagtattatttgt cagccacacagcgtggctgcagaaattaactcttctcaacaggatcgacttcctccatcaactatttgagaaatgtgtta aatga |
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Protein
| Protein ID | pfu_aug2.0_2366.1_22042.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2366.1_22042.t1 MSRIQLLTVFARGHHGSLPWKCKTRFMKRSTTNHALSRSVTSGSEKEKIEAQTNNVEESAALLDEDGSKPASDKSTENVR MKVQAEDKRKYIKSNIFKILRKPEHVEKLSELKEMDSAESEEKLVGLDQLQKTSEKEEKSKEKMGLELGSIRLDLKRNIG AVKKTATLFEEEINKSTMKYSDYISDVLLHTKDQPKSKGLDKLEAILNKQNGPNVVQEKESLQIQEDKISDDDNEKISDV SLQAETKPQDEIKYDLQSKMRPPMVTDRPKPSDDLSERLSVAEHTTVPKKSKQKKEVARPPLVRPIPEILDSIKCSENME ECVQALNNISWSYKNTTSVDPEMLKAIEQSPKLAYILNKSIQSLKSNTMETYGLAKVFIAISVLPFVDTDSKTLVANEVK EKMSHFHLSKLLNFYATIESQSDLSWLPVKFVEDMKKALQFAWLDISNAEQLAKFLKIFTRPDPKFIPKLESKILDFIDD MSLREIIEVLKFLERSGNRDMKILRYCAHNLQKPDIHVARISEIRDILYCFSRLNFMQENILKTLAEKLVSGLKTDSFSY HTTNVLKTLDSINHSFASLRYYDKRFISIVLNHLNSTNSQISQKQAASFLFAFAKSGISLSHKSTMQKLVDVATKNSQMR DHSPVAWLRLVWSTCVLAVGSEELVSGVLDKYFVNQVVGGKNKTNHLMLRNIDSYAKHCIENYRGNRLTDQVEPLDQQHQ VGEKCVETFEESSGVQLREFRSVIQRMAPDESYVEIGKRFPEGFTIDAVVCLDDFGKIQSPSVKGTRRVAIKYLTFYETL MPVGAPNGASKLMRNQLNKMGYRVLFVSHTAWLQKLTLLNRIDFLHQLFEKCVK |
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