Gene
| Gene Model ID | pfu_aug2.0_2366.1_22045 |
|---|---|
| Locus | scaffold2366.1 : 90636 ... 99975 : - |
| To GenomeBrowser | scaffold2366.1:90636..99975 |
| Genes list of scaffold | scaffold2366.1 |
| Synonym | pfu_aug1.0_2097.1_08222 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2366.1_22045.t1 | 1 | 1 | Ependymin | 73 | 200 | 1.7e-18 | 66.6 | 1.5e-22 | 2.3e-18 | 66.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2366.1_22045.t1 | gi|260803944|ref|XP_002596849.1| | hypothetical protein BRAFLDRAFT_269210 [Branchiostoma floridae] | 5.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_2366.1_22045.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2366.1_22045.t1 atgaccatgtacggtgtaactctcctcctctgtctatctgtggcagtgtttgcccaggatcctatgccatgcaatccccc tcagcagtgggaagcacgagagatcagggttgataggcaacagaactttgaggagaggagaagattggtttatgatgcag caaatagacgtgagaggcgaattgaagaggtggaagttaatagcacaagaagcttctacgatgaactcattctttggaac gagattaatgttgaaaataagtcagagaataaacaatacagagtagatctgaggaccaagaaatgtaatataacggaacc atacaggccatggcatcctagaggggtaccaccagagtctaagtttgaatatgaagcggtgattggagcagcaggtatac ctggcgaatcagtcacaatacagattttcacttggaattcaactgacggagattataaccgtggacttgttacatcccca gactgtatccctattcaaaacgtccatgcttcacaaaagtatggctttgaggaatcatcatattatgatctgactgctgg gatatcagaccccgaggcattcctgattccagaaccatgtaaaacaccacccccaccgctgccaccacatttttaa |
|
Protein
| Protein ID | pfu_aug2.0_2366.1_22045.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2366.1_22045.t1 MTMYGVTLLLCLSVAVFAQDPMPCNPPQQWEAREIRVDRQQNFEERRRLVYDAANRRERRIEEVEVNSTRSFYDELILWN EINVENKSENKQYRVDLRTKKCNITEPYRPWHPRGVPPESKFEYEAVIGAAGIPGESVTIQIFTWNSTDGDYNRGLVTSP DCIPIQNVHASQKYGFEESSYYDLTAGISDPEAFLIPEPCKTPPPPLPPHF |
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