Gene
| Gene Model ID | pfu_aug2.0_237.1_23720 |
|---|---|
| Locus | scaffold237.1 : 125446 ... 136133 : + |
| To GenomeBrowser | scaffold237.1:125446..136133 |
| Genes list of scaffold | scaffold237.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_237.1_23720.t1 | 2 | 1 | Na_Ca_ex | 26 | 37 | 1.4e-14 | 53.8 | 0.52 | 7700.0 | -3.7 |
| pfu_aug2.0_237.1_23720.t1 | 2 | 2 | Na_Ca_ex | 57 | 173 | 1.4e-14 | 53.8 | 9.4e-19 | 1.4e-14 | 53.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_237.1_23720.t1 | gi|736251106|ref|XP_010788061.1| | PREDICTED: sodium/calcium exchanger 1-like, partial [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_237.1_23720.t1 | gi|736158884|ref|XP_010780950.1| | PREDICTED: sodium/calcium exchanger 1-like, partial [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_237.1_23720.t1 | gi|524880766|ref|XP_005097042.1| | PREDICTED: sodium/calcium exchanger 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_237.1_23720.t1 | gi|657735292|ref|XP_008311920.1| | PREDICTED: sodium/calcium exchanger 3-like [Cynoglossus semilaevis] | 0.0 |
| pfu_aug2.0_237.1_23720.t1 | gi|699593617|ref|XP_009867340.1| | PREDICTED: sodium/calcium exchanger 1-like, partial [Apaloderma vittatum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_237.1_23720.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_237.1_23720.t1 atgtttcccactcttgttggtgatgatgacgaagaagattctgaagagaagttaccctcctgtgtggattatgtaatgca tttccttaccctgttttggaaggttctctttgcgtgtgtccctccaactgattacgtaggaggatgggcatgttttgtgg tgtccattttaggtatcgggttgctgacagccttccttggtgacctggcctccagctttggctgcactataggccttaaa gattcggtcaccgctatctcatttgtagctcttgacacctttgctagtaaagtggcagcaatcaatgacaagtatgcaga ctcatctataggcaatgtaactggaagtaatgcagtcaacgtatttctgggaatcggcattgcatggtcaatggcagcca tttattgggaagttaagggggaaacattcaaagttcccactggagatcttgctatgtctgtgacagtcttctgtattgaa gcatttattacaattattgtgttactgattaggagaaaatttggtggagagttaggagggccgaaagtaaccaagaacgt agaatcttctctaagttacagtgagttttga |
|
Protein
| Protein ID | pfu_aug2.0_237.1_23720.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_237.1_23720.t1 MFPTLVGDDDEEDSEEKLPSCVDYVMHFLTLFWKVLFACVPPTDYVGGWACFVVSILGIGLLTAFLGDLASSFGCTIGLK DSVTAISFVALDTFASKVAAINDKYADSSIGNVTGSNAVNVFLGIGIAWSMAAIYWEVKGETFKVPTGDLAMSVTVFCIE AFITIIVLLIRRKFGGELGGPKVTKNVESSLSYSEF |
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