Gene
| Gene Model ID | pfu_aug2.0_237.1_23722 |
|---|---|
| Locus | scaffold237.1 : 166834 ... 183357 : + |
| To GenomeBrowser | scaffold237.1:166834..183357 |
| Genes list of scaffold | scaffold237.1 |
| Synonym | pfu_aug1.0_4296.1_44911 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| potassium channel subfamily k member 16-like | GO:0006811 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_237.1_23722.t1 | 4 | 1 | Ion_trans_2 | 16 | 28 | 1.2e-22 | 79.4 | 0.37 | 790.0 | -0.2 |
| pfu_aug2.0_237.1_23722.t1 | 4 | 2 | Ion_trans_2 | 52 | 90 | 1.2e-22 | 79.4 | 3.0e-10 | 6.4e-07 | 28.9 |
| pfu_aug2.0_237.1_23722.t1 | 4 | 3 | Ion_trans_2 | 123 | 205 | 1.2e-22 | 79.4 | 3.2e-20 | 6.8e-17 | 60.9 |
| pfu_aug2.0_237.1_23722.t1 | 4 | 4 | Ion_trans_2 | 226 | 242 | 1.2e-22 | 79.4 | 1.1 | 2300.0 | -1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_237.1_23722.t1 | gi|676465507|ref|XP_009057266.1| | hypothetical protein LOTGIDRAFT_121567 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_237.1_23722.t1 | gi|585645174|ref|XP_006882080.1| | PREDICTED: potassium channel subfamily K member 16 [Elephantulus edwardii] | 4.0e-29 |
| pfu_aug2.0_237.1_23722.t1 | gi|556946879|ref|XP_005986568.1| | PREDICTED: potassium channel subfamily K member 16-like [Latimeria chalumnae] | 3.0e-28 |
| pfu_aug2.0_237.1_23722.t1 | gi|525000115|ref|XP_005047796.1| | PREDICTED: potassium channel subfamily K member 16-like isoform X1 [Ficedula albicollis] | 4.0e-28 |
| pfu_aug2.0_237.1_23722.t1 | gi|525000117|ref|XP_005047797.1| | PREDICTED: potassium channel subfamily K member 16-like isoform X2 [Ficedula albicollis] | 1.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_237.1_23722.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_237.1_23722.t1 atgggtgaaggtccgggatggaaacaaatattaccactgaccattgcagtggtcatctacctgtgtgttggagcggcgat ctttagtgagattgaaggcgatccagagattcataggagaatcaaactgaaacgctatcttgacgactttttagggtatg gaaacatggctccgaggacaggagtcggcaagattgcactggtcgtgtacgccgtttttgggattcctgccaccatgatt ctcctaagcttcattggtcagttattggtcaagctatccaaaaaagtgaatcgctgtaaggtttgctctgagaaaccagt gatgaacaaagttttgaacatgatactcattgtcagtttgggactcacaatgctttttggacttccggctcttgtgtttt cggaagtagaaaaatgggatttcctggagggattatattactgctttgtcaccttaagtactataggattcggcgactac gtagccgctatctctgagaaccgtttgagtgaccgtggtgctggggacgtgtatagggtagtgacgtttatatggattct gttcggactgtcatatttgtctttggttataaactacatttccaacgtattgatgctgaaggcagagaaaatggagagac ttacaaaggacagacttgagtacgacttccctaanggactgtcatatttgtctttggttataaactacatttccaacgta ttgatgctgaaggcagagaaaatggagagacttacaaaggacagacttgaggcagaagtatcaagacttcaacaagagct atcaaagacaaaacgatctgtgtataagacagcggtgaatgtgacttcctctgtaaccggatacatgaactgggagacac ctgtcggcgacgcaattgatacttcccaagacgcaaagggtgttaagctgttgagtgtatgcaaccttggagaaacaaag aatggagaagtcccctcgtga |
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Protein
| Protein ID | pfu_aug2.0_237.1_23722.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_237.1_23722.t1 MGEGPGWKQILPLTIAVVIYLCVGAAIFSEIEGDPEIHRRIKLKRYLDDFLGYGNMAPRTGVGKIALVVYAVFGIPATMI LLSFIGQLLVKLSKKVNRCKVCSEKPVMNKVLNMILIVSLGLTMLFGLPALVFSEVEKWDFLEGLYYCFVTLSTIGFGDY VAAISENRLSDRGAGDVYRVVTFIWILFGLSYLSLVINYISNVLMLKAEKMERLTKDRLEYDFPXGLSYLSLVINYISNV LMLKAEKMERLTKDRLEAEVSRLQQELSKTKRSVYKTAVNVTSSVTGYMNWETPVGDAIDTSQDAKGVKLLSVCNLGETK NGEVPS |
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