Gene
| Gene Model ID | pfu_aug2.0_237.1_23731 |
|---|---|
| Locus | scaffold237.1 : 316385 ... 321603 : - |
| To GenomeBrowser | scaffold237.1:316385..321603 |
| Genes list of scaffold | scaffold237.1 |
| Synonym | pfu_aug1.0_59.1_43451 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mad2l1-binding protein | GO:0043231 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_237.1_23731.t1 | 2 | 1 | p31comet | 10 | 130 | 2.3e-10 | 39.7 | 1.3e-10 | 9.9e-07 | 27.8 |
| pfu_aug2.0_237.1_23731.t1 | 2 | 2 | p31comet | 245 | 261 | 2.3e-10 | 39.7 | 3.7e-05 | 0.27 | 10.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_237.1_23731.t1 | gi|676431572|ref|XP_009046296.1| | hypothetical protein LOTGIDRAFT_111103 [Lottia gigantea] | 2.0e-34 |
| pfu_aug2.0_237.1_23731.t1 | gi|524887935|ref|XP_005100549.1| | PREDICTED: uncharacterized protein LOC101860661 [Aplysia californica] | 7.0e-31 |
| pfu_aug2.0_237.1_23731.t1 | gi|291242963|ref|XP_002741347.1| | PREDICTED: MAD2L1-binding protein-like [Saccoglossus kowalevskii] | 1.0e-16 |
| pfu_aug2.0_237.1_23731.t1 | gi|390343921|ref|XP_003725995.1| | PREDICTED: MAD2L1-binding protein-like [Strongylocentrotus purpuratus] | 3.0e-12 |
| pfu_aug2.0_237.1_23731.t1 | gi|156405148|ref|XP_001640594.1| | predicted protein [Nematostella vectensis] | 5.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_237.1_23731.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_237.1_23731.t1 atgcagctacgacgggatacactccgaatgaagagggcaattaaggccatcagtaatttgcagcaaatgtttaaggagat ttctgccgtgtttgaacagtgcccagaaatcaaacaagtcatgcttgtactgggtagcacaacaattagtcctaaggaat cttacctgatcaacttaccaccaccgaacccagaggctgataacctggcactgaaaaactgcactagaagtcttttcaga caattgatcatgcaagattttctcaacggggcaaagtccatttcacccacttcattatcggtattggtgaccgctccaag gacgatggaaatgtcatggtttctaccaaataaaagcttcaagtcaccgctgcgtggagaaaaatttgtgtttgattttg taaacaacgtaggatcacacgatcaaagtgtaatgggttctcatgatattgatatgtcgggtatcgagcctttagagtct tcggtgatagatctatctgtaatcaataaagcagagcaactactggacttgacaaacacaagtagtagttctatgacatc agaggatgttgattcaactcggagtttattgagacaattcagcgactctgagctttcatctaaaacatcctcctctttaa attcatcgactgttacgtcaggatacaaatatgacagcatgtcatcagagagggattgttctcatgatgaaatgctacag gaaaatggagaagataacatgtacatgtggtttcaagcccctataaggtttaaggggtacaaatgtaaacaaaaataa |
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Protein
| Protein ID | pfu_aug2.0_237.1_23731.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_237.1_23731.t1 MQLRRDTLRMKRAIKAISNLQQMFKEISAVFEQCPEIKQVMLVLGSTTISPKESYLINLPPPNPEADNLALKNCTRSLFR QLIMQDFLNGAKSISPTSLSVLVTAPRTMEMSWFLPNKSFKSPLRGEKFVFDFVNNVGSHDQSVMGSHDIDMSGIEPLES SVIDLSVINKAEQLLDLTNTSSSSMTSEDVDSTRSLLRQFSDSELSSKTSSSLNSSTVTSGYKYDSMSSERDCSHDEMLQ ENGEDNMYMWFQAPIRFKGYKCKQK |
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