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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_2373.1_12135
Locus scaffold2373.1 : 15566 ... 60565 : +
To GenomeBrowser scaffold2373.1:15566..60565
Genes list of scaffold scaffold2373.1
Synonym pfu_aug1.0_1801.1_00850

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_2373.1_12135.t1 gi|676447680|ref|XP_009051487.1| hypothetical protein LOTGIDRAFT_228261 [Lottia gigantea] 0.0
pfu_aug2.0_2373.1_12135.t1 gi|585646731|ref|XP_006811785.1| PREDICTED: nuclear pore complex protein Nup160-like [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_2373.1_12135.t1 gi|260805094|ref|XP_002597422.1| hypothetical protein BRAFLDRAFT_122633 [Branchiostoma floridae] 0.0
pfu_aug2.0_2373.1_12135.t1 gi|390356292|ref|XP_788110.3| 0.0
pfu_aug2.0_2373.1_12135.t1 gi|632984959|ref|XP_007909412.1| PREDICTED: nuclear pore complex protein Nup160 isoform X2 [Callorhinchus milii] 0.0

Transcript
Transcript IDpfu_aug2.0_2373.1_12135.t1
Definition-
>pfu_aug2.0_2373.1_12135.t1
atgtctatgccttctctatgtcatctaatgtctggcgtgagggggatgcagattttaacatcaacagttaaacagataac
agagactggattgttagtcgccagggaccttctcatcttacaaattgcaatcattagcttaggggagaatgatggagtga
gtcctgaccaagcagaagaaattcatagagaacttataccacaaacatgtgaactggtgcatgtttatatgttgatgaag
tggattacaaatcaaatcgctgttccagtgcagaactcatctatagaaaccaatatccggcaaatggcatcacttgaaat
taccaatacacaagatttgcaagaaaagcagagacttggcctgattcataaccaaagagtgactgttagtactttgtttg
ctatgagaattggtggaaaccagactagaagtatgctggctaacaaccgtacaatactcacagaaccttactggaataca
gctgtattgtcatttgcaaaactcttagttagcctcatttggccgatgggtgagaacatgttgtttccagatttccttgt
cagttgctgtcagtacctacccctacagcaatatgtatacagaacccatggttggtgctctgtcaatgtagcctcaagga
gatttatgcttggcatggcttacctacatttcgatgaaccacaaaaggctgcagagtgttttgaccaagctaaagaaggt
ttgagaaatgatgtctatttacgacagaaagtgttacagtcggaggttaatgacatcaggaagctggaaatcctttttta
tctgaaacccactctatggtccaagctttttaaatatcagctacagctcggccacaatgaggaggcatacggtgcaatga
tctgtaatccagatccaaccaggaaaaaagactgtctgagacaactgttggtcacattatgtgagagaggagatttaagg
acaatcaagtcttttaattatattgatatggaggatgatgtggtgtctatattggagaatcgtgccagatctgtagatat
agcaacacagaactactaccatttattgtatgcctttcatgtgtccagaaataacttctctagagctggtgccatgatgt
acgagcatggaatgcgtctgggcatggagttaggtgggcaccaaggcctccaacgacaggcacaatgttatctggctgca
cttaatgcacttcgtatagctgatgttaactatgcctggattataaatcctaggtctgccattgaacaaagagtagtcaa
tcaatag

Protein
Protein IDpfu_aug2.0_2373.1_12135.t1
Definition-
>pfu_aug2.0_2373.1_12135.t1
MSMPSLCHLMSGVRGMQILTSTVKQITETGLLVARDLLILQIAIISLGENDGVSPDQAEEIHRELIPQTCELVHVYMLMK
WITNQIAVPVQNSSIETNIRQMASLEITNTQDLQEKQRLGLIHNQRVTVSTLFAMRIGGNQTRSMLANNRTILTEPYWNT
AVLSFAKLLVSLIWPMGENMLFPDFLVSCCQYLPLQQYVYRTHGWCSVNVASRRFMLGMAYLHFDEPQKAAECFDQAKEG
LRNDVYLRQKVLQSEVNDIRKLEILFYLKPTLWSKLFKYQLQLGHNEEAYGAMICNPDPTRKKDCLRQLLVTLCERGDLR
TIKSFNYIDMEDDVVSILENRARSVDIATQNYYHLLYAFHVSRNNFSRAGAMMYEHGMRLGMELGGHQGLQRQAQCYLAA
LNALRIADVNYAWIINPRSAIEQRVVNQ

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