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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_2374.1_15504
Locus scaffold2374.1 : 67796 ... 70453 : +
To GenomeBrowser scaffold2374.1:67796..70453
Genes list of scaffold scaffold2374.1
Synonym pfu_aug1.0_6251.1_23985

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_2374.1_15504.t1 1 1 Myosin_tail_1 2 155 4.2039e-45 153.8 0.0 4.2039e-45 153.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_2374.1_15504.t1 gi|662204082|ref|XP_008475404.1| PREDICTED: myosin heavy chain, muscle-like [Diaphorina citri] 1.0e-33
pfu_aug2.0_2374.1_15504.t1 gi|641654490|ref|XP_008179234.1| PREDICTED: myosin heavy chain, muscle isoform X24 [Acyrthosiphon pisum] 3.0e-33
pfu_aug2.0_2374.1_15504.t1 gi|641654480|ref|XP_008179228.1| PREDICTED: myosin heavy chain, muscle isoform X19 [Acyrthosiphon pisum] 3.0e-33

Transcript
Transcript IDpfu_aug2.0_2374.1_15504.t1
Definition-
>pfu_aug2.0_2374.1_15504.t1
atgctcagcggagagacagatgaaattcgttcatcattggacaatgccgagagagcccgcaaaatggccgagaacgatct
cttccaggccaatgaccgtgtcaatgaactgaacagtcaaattacatctgtacaggcttctaagaggaaacttgagagcg
atgtccagacattgtcctccgacttggaagatcttcagaacgaaatgagggctgcagatgaccgcgccaggaagtcggct
gctgaagctgcgcgtctggctgaagagcttcacgctgagcaagatcataaccaacaaggcttgaaggccaggaaatccct
tgagacccaggttaaggagctccaagtacatctggaggaggctgaacaatcagctctgaagggcggaaagagaatggtgg
ccaagctggaaggcaggaatccgagcttgacagcgaacaaagacgccatgctgagacgcaaaagaacgcacgtaaatctg
accgcagaattaaggaattggcgttccaatgtgacgaggaacgcaagaacctggagcgttgtcaagagatga

Protein
Protein IDpfu_aug2.0_2374.1_15504.t1
Definition-
>pfu_aug2.0_2374.1_15504.t1
MLSGETDEIRSSLDNAERARKMAENDLFQANDRVNELNSQITSVQASKRKLESDVQTLSSDLEDLQNEMRAADDRARKSA
AEAARLAEELHAEQDHNQQGLKARKSLETQVKELQVHLEEAEQSALKGGKRMVAKLEGRNPSLTANKDAMLRRKRTHVNL
TAELRNWRSNVTRNARTWSVVKR

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