Gene
| Gene Model ID | pfu_aug2.0_2374.1_15505 |
|---|---|
| Locus | scaffold2374.1 : 74050 ... 85735 : - |
| To GenomeBrowser | scaffold2374.1:74050..85735 |
| Genes list of scaffold | scaffold2374.1 |
| Synonym | pfu_aug1.0_6251.1_23984 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cyclin-y-like protein 1 | GO:0000079 GO:0019901 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2374.1_15505.t1 | 1 | 1 | Cyclin_N | 75 | 185 | 1.9e-13 | 50.1 | 3.7e-17 | 2.7e-13 | 49.5 |
| pfu_aug2.0_2374.1_15505.t1 | 1 | 1 | Cyclin | 87 | 184 | 1.4e-11 | 45.0 | 2.4e-15 | 1.8e-11 | 44.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2374.1_15505.t1 | gi|573897238|ref|XP_006636356.1| | PREDICTED: cyclin-Y-like protein 1-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_2374.1_15505.t1 | gi|585677210|ref|XP_006819101.1| | PREDICTED: cyclin-Y-like protein 1-B-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_2374.1_15505.t1 | gi|91081899|ref|XP_976020.1| | PREDICTED: cyclin-Y-like protein 1 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_2374.1_15505.t1 | gi|115529313|ref|NP_001070188.1| | cyclin-Y-like protein 1 [Danio rerio] | 0.0 |
| pfu_aug2.0_2374.1_15505.t1 | gi|665813915|ref|XP_008555537.1| | PREDICTED: cyclin-Y-like protein 1 [Microplitis demolitor] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2374.1_15505.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2374.1_15505.t1 atgtatgtatcattatgcattgttagtgtggtctcccctcccgccccgctaaggaaatacagctcatgctcaactatctt cattgacgattccaccgtcagccaaccaaacttaaagaatacaatcaaagcagtagcgtttgccatatatttccatatac ggaatagagatagtaatagaacactagaaatctttgatgaaaagattcatcctttatcgagagagatggttcctgatgat tatgacaggagagaccctgagcacaaacagatctatagatttgttcgcacactgtttagtgctgcccaacttactgcgga atgtgcaatagttactttggtttatttagagagacttttacattatgccgagatagacattatgccggcaaattggaaga gaatcgtccttggtgccattttacttgcatcaaaagtttgggacgatcaggcagtgtggaatgtagattactgtcagata ctgaaggacatagcggtagaagatatgaatgatctagagcggcagtacttggagatgttacagtttaacattaatgtgcc gtcaagtgtttatgccaagtattactttgatctacgtgctctggctgatgctaacgacctcagtttccccctggaacctc tcagtaaagacagggcgcttaaattggaggcgatgtccaatgaagaaaatttagagaagatctgcaatcggccaacgtta actagaacatatgttttgaagcagacagacattaagtcttactattttaatagaccaatatga |
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Protein
| Protein ID | pfu_aug2.0_2374.1_15505.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2374.1_15505.t1 MYVSLCIVSVVSPPAPLRKYSSCSTIFIDDSTVSQPNLKNTIKAVAFAIYFHIRNRDSNRTLEIFDEKIHPLSREMVPDD YDRRDPEHKQIYRFVRTLFSAAQLTAECAIVTLVYLERLLHYAEIDIMPANWKRIVLGAILLASKVWDDQAVWNVDYCQI LKDIAVEDMNDLERQYLEMLQFNINVPSSVYAKYYFDLRALADANDLSFPLEPLSKDRALKLEAMSNEENLEKICNRPTL TRTYVLKQTDIKSYYFNRPI |
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