Gene
| Gene Model ID | pfu_aug2.0_2375.1_18794 |
|---|---|
| Locus | scaffold2375.1 : 7470 ... 17625 : - |
| To GenomeBrowser | scaffold2375.1:7470..17625 |
| Genes list of scaffold | scaffold2375.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| eukaryotic translation initiation factor 6 | GO:0003743 GO:0005730 GO:0005737 GO:0006413 GO:0007229 GO:0042256 GO:0042273 GO:0043022 GO:0043023 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2375.1_18794.t1 | 1 | 1 | eIF-6 | 4 | 204 | 0.0 | 281.0 | 0.0 | 0.0 | 280.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2375.1_18794.t1 | gi|542186370|ref|XP_005469803.1| | PREDICTED: eukaryotic translation initiation factor 6-like isoform X1 [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_2375.1_18794.t1 | gi|296531410|ref|NP_001171848.1| | eukaryotic translation initiation factor 6 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_2375.1_18794.t1 | gi|597754851|ref|XP_007239222.1| | PREDICTED: eukaryotic translation initiation factor 6-like [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_2375.1_18794.t1 | gi|82184729|sp|Q6GR45.1|IF6_XENLA | Eukaryotic translation initiation factor 6 [Xenopus laevis] | 0.0 |
| pfu_aug2.0_2375.1_18794.t1 | gi|55742154|ref|NP_001006884.1| | eukaryotic translation initiation factor 6 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2375.1_18794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2375.1_18794.t1 atggccgtacgcgctcaatttgaagggaacaatgaaataggggtgttttcgaaattgacaaactcttactgtcttgttgc aatcggtggatcagaaaatttttacagtgtttttgagggggaattgtcagagaccatacctgttattcatgccagtttag caggatgtaggatcattggtcgcatgtgtgtgggaaataaaaaaggacttcttgtgccaaactcaaccacagaccaggaa ttacagcatatcagaaattctctcccagacagtgtcaaagtacaaagagtagaggagaggttatctgcccttggaaatgt tgtggcttgtaatgactatgtagcattggttcatccggacttagatagggaaactgaggatattatcacagatgtaatgg gagtagaggtgttcaggcaaacagtagctgaaaatgtcttagttggaagttactgtgctatcagcaatcagggagggctg gtccatcccaaaacaaaaatggaagatctggaggagttgtcctccttacttcaagtacctttagtggcgggtacagtgaa tcgaggtagcgacgttattgctgctggtatggtggtaaacgattggatggcattctgtggcctcgatacaacaagtactg aactctctgtgatagaaagtgtgttcaaactcggtgatcgacaaccaagtaatatatcatcagatatgagggaaagtctc attgacagtatgacgtag |
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Protein
| Protein ID | pfu_aug2.0_2375.1_18794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2375.1_18794.t1 MAVRAQFEGNNEIGVFSKLTNSYCLVAIGGSENFYSVFEGELSETIPVIHASLAGCRIIGRMCVGNKKGLLVPNSTTDQE LQHIRNSLPDSVKVQRVEERLSALGNVVACNDYVALVHPDLDRETEDIITDVMGVEVFRQTVAENVLVGSYCAISNQGGL VHPKTKMEDLEELSSLLQVPLVAGTVNRGSDVIAAGMVVNDWMAFCGLDTTSTELSVIESVFKLGDRQPSNISSDMRESL IDSMT |
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