Gene
| Gene Model ID | pfu_aug2.0_2375.1_18795 |
|---|---|
| Locus | scaffold2375.1 : 23519 ... 29305 : - |
| To GenomeBrowser | scaffold2375.1:23519..29305 |
| Genes list of scaffold | scaffold2375.1 |
| Synonym | pfu_aug1.0_11695.1_32100 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2375.1_18795.t1 | 3 | 1 | Otopetrin | 68 | 114 | 4.5e-18 | 65.4 | 0.055 | 810.0 | -1.3 |
| pfu_aug2.0_2375.1_18795.t1 | 3 | 2 | Otopetrin | 175 | 227 | 4.5e-18 | 65.4 | 0.0011 | 17.0 | 4.2 |
| pfu_aug2.0_2375.1_18795.t1 | 3 | 3 | Otopetrin | 249 | 541 | 4.5e-18 | 65.4 | 3.0e-22 | 4.5e-18 | 65.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2375.1_18795.t1 | gi|189236361|ref|XP_967894.2| | PREDICTED: otopetrin-2 [Tribolium castaneum] | 7.0e-10 |
| pfu_aug2.0_2375.1_18795.t1 | gi|328788858|ref|XP_394346.3| | PREDICTED: otopetrin-3-like isoform X6 [Apis mellifera] | 8.0e-10 |
| pfu_aug2.0_2375.1_18795.t1 | gi|571513768|ref|XP_006568285.1| | PREDICTED: otopetrin-3-like isoform X1 [Apis mellifera] | 1.0e-09 |
| pfu_aug2.0_2375.1_18795.t1 | gi|380010959|ref|XP_003689583.1| | PREDICTED: otopetrin-3-like isoform X2 [Apis florea] | 2.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_2375.1_18795.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2375.1_18795.t1 atgccccagatactctcgatggcttacccaccgtttttagttccgcacagtccagcgcagtggggaattatcatcatatg tagtcatcaaagattcttcaccatgattctggaggtcctgaagtctattttcatcctacctgttacagcaggaaatctaa ttcgtcgtcgaaatgggaagagaggtcacgatggaactgtttcctctttggtgctcatcgttttcatcatctccctggcg tttgtgacgttatacgtgacgtcatcaagtaatattcccgtcggcgaagatccaagtactgctgttcgatatgtgctcat agtaatcatcataattggaatagcttctatagcagtaatttgtctcttgatcagagaagagtctgcaagcgagggcgttt tagaggaactggaagtatcaaagaaaccaccgggactgagattcaaattcctctgcctcttcacagcagccatcatattt gattcaatactattcattgtgctatgtatagataaaatatcctcagctatcggattttacactctacaaacaattttgat agcttgttatcgaaacagtgtgatttcattaaatgggtcgatgaagttacaccttgggatgatgtttattttggtggcag atttagcaatatggttcgaggcagtcctgagcgagaaggaagaccttgataaagacttgaatgacacgagactggtgtat cgagacacccatggtgttgaatactacaactgtactcaagtctctaaagttgactgctttgttcacagggtccaacctta catttcccctgtaataacggaatactgtctcgtttctgtaacatttattcttcagatatggggcagagttaaagatgccc atttttctcgccttgtgagtgagagctccagtgatttgacaggagagacgtcttcgcttttgggtgaaaattctaccgaa agagacatacaagctacgtcgcagcagtattctctaacagataccattactcacaatcgttattctgtgtctttgttcgt gtctgtggccatcggtggcgtcatggcgacaattatgataattctcattctggttttctccacaaaagtaaacatgggaa tgcttcatgtatggcaatcgttccgtttgacctataacatagtatttttacttatcacaatagctggatacgcgttccta tccatacagtgcgtcccagatccgcgtccacgaccagttagccctccagaaaacgtgcttctcctcgccgtctttggtgt actatcataccacatctgtgggatgtatgcaggagcgtttactggcggagagctggggaccatactccttgcagagagca taatcgactctatcagtgtatattatcaaacggtccttatcctgcaagcaaatagatttcgcagaatacgaacgcatcag ggatgttcaataaagaacatttttgctcttctagtaaccctaaatctgggtctatgggtatcaaatagctttcttgagaa gaatcttccctttatcaatgtagtgaaagtaaatttctatggccgtgaacgatgggattttgccaaacttgttgtgtttc ccatctatacattttacagattcacgtcggccatggcgtattacgaactttattacttctttaaatcaacatacgtaaca ccttaa |
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Protein
| Protein ID | pfu_aug2.0_2375.1_18795.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2375.1_18795.t1 MPQILSMAYPPFLVPHSPAQWGIIIICSHQRFFTMILEVLKSIFILPVTAGNLIRRRNGKRGHDGTVSSLVLIVFIISLA FVTLYVTSSSNIPVGEDPSTAVRYVLIVIIIIGIASIAVICLLIREESASEGVLEELEVSKKPPGLRFKFLCLFTAAIIF DSILFIVLCIDKISSAIGFYTLQTILIACYRNSVISLNGSMKLHLGMMFILVADLAIWFEAVLSEKEDLDKDLNDTRLVY RDTHGVEYYNCTQVSKVDCFVHRVQPYISPVITEYCLVSVTFILQIWGRVKDAHFSRLVSESSSDLTGETSSLLGENSTE RDIQATSQQYSLTDTITHNRYSVSLFVSVAIGGVMATIMIILILVFSTKVNMGMLHVWQSFRLTYNIVFLLITIAGYAFL SIQCVPDPRPRPVSPPENVLLLAVFGVLSYHICGMYAGAFTGGELGTILLAESIIDSISVYYQTVLILQANRFRRIRTHQ GCSIKNIFALLVTLNLGLWVSNSFLEKNLPFINVVKVNFYGRERWDFAKLVVFPIYTFYRFTSAMAYYELYYFFKSTYVT P |
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