Gene
| Gene Model ID | pfu_aug2.0_2376.1_22048 |
|---|---|
| Locus | scaffold2376.1 : 61896 ... 78178 : + |
| To GenomeBrowser | scaffold2376.1:61896..78178 |
| Genes list of scaffold | scaffold2376.1 |
| Synonym | pfu_aug1.0_87743.1_56738 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2376.1_22048.t1 | 2 | 1 | CD20 | 30 | 170 | 1.6e-10 | 41.0 | 9.0e-11 | 1.9e-07 | 31.1 |
| pfu_aug2.0_2376.1_22048.t1 | 2 | 2 | CD20 | 235 | 289 | 1.6e-10 | 41.0 | 7.6e-06 | 0.016 | 15.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2376.1_22048.t1 | gi|260828965|ref|XP_002609433.1| | hypothetical protein BRAFLDRAFT_124636 [Branchiostoma floridae] | 1.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_2376.1_22048.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2376.1_22048.t1 atgggaacgaaggataaatccaagtacacggaagtggagggagtagaaaccacagatatagagaacttcccgtattccgc actgaagactcttggcggtattcacctcggactaggtatcacgtgcgttgtcctgggactgatcgacgccattttgtacc tgtttgtagatgacagtgatctgatgtcatcaaatacaacattgatgacgatgacgatatcatctacaccaatatggtgt gggctgtggttttgcgtcactggttgtatggcggcttgtatgtcaaaacacaacaagagcagtctctcatattttaaact aaccttccttgtgctgagcatactgtgtgctgccttgtttgctccgctgtgctgtgttatgaacattgtgatgtccacag agcgacatgaccttgaaccagattcctatagatggatggtgtccattttggtggcgttcttttcctttaatgaggccgta ctctccgtcgtatcggcgtcaatatgttgctgctgtgctgttattaagaccaccaagtgtttcatgcaaataggagacgc tgactctccccgggtacctggtctcacttcggaatattgttcattccaagacataatgggaacgaaggataaatccaagt acacagaggtggagggagtagaaaccacagatatagagaacttcccgtactccgcactgaagactcttggcggtattcac ctcggactaggtatcacgtgcgttgtcctgggactgatcgacgccattttgtacctgtttgtagatgacagtgatctgat gtcatcaaatacgacattgatgacgatgacgatatcatctacaccaatatggtgtggactgtgggtaggttgtggagtag attatttggattag |
|
Protein
| Protein ID | pfu_aug2.0_2376.1_22048.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2376.1_22048.t1 MGTKDKSKYTEVEGVETTDIENFPYSALKTLGGIHLGLGITCVVLGLIDAILYLFVDDSDLMSSNTTLMTMTISSTPIWC GLWFCVTGCMAACMSKHNKSSLSYFKLTFLVLSILCAALFAPLCCVMNIVMSTERHDLEPDSYRWMVSILVAFFSFNEAV LSVVSASICCCCAVIKTTKCFMQIGDADSPRVPGLTSEYCSFQDIMGTKDKSKYTEVEGVETTDIENFPYSALKTLGGIH LGLGITCVVLGLIDAILYLFVDDSDLMSSNTTLMTMTISSTPIWCGLWVGCGVDYLD |
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