Gene
| Gene Model ID | pfu_aug2.0_238.1_27081 |
|---|---|
| Locus | scaffold238.1 : 85049 ... 92805 : - |
| To GenomeBrowser | scaffold238.1:85049..92805 |
| Genes list of scaffold | scaffold238.1 |
| Synonym | pfu_aug1.0_8806.1_09840 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_238.1_27081.t1 | 4 | 1 | TPR_11 | 207 | 265 | 2.2e-07 | 30.3 | 3.0e-05 | 0.064 | 12.9 |
| pfu_aug2.0_238.1_27081.t1 | 5 | 1 | Sel1 | 237 | 270 | 9.79508e-43 | 143.6 | 2.6e-11 | 5.6e-08 | 33.1 |
| pfu_aug2.0_238.1_27081.t1 | 4 | 2 | TPR_11 | 269 | 303 | 2.2e-07 | 30.3 | 6.3e-06 | 0.013 | 15.0 |
| pfu_aug2.0_238.1_27081.t1 | 5 | 2 | Sel1 | 271 | 305 | 9.79508e-43 | 143.6 | 3.4e-14 | 7.1e-11 | 42.3 |
| pfu_aug2.0_238.1_27081.t1 | 5 | 3 | Sel1 | 308 | 340 | 9.79508e-43 | 143.6 | 1.2e-05 | 0.026 | 15.1 |
| pfu_aug2.0_238.1_27081.t1 | 4 | 3 | TPR_11 | 322 | 354 | 2.2e-07 | 30.3 | 0.016 | 34.0 | 4.1 |
| pfu_aug2.0_238.1_27081.t1 | 5 | 4 | Sel1 | 341 | 376 | 9.79508e-43 | 143.6 | 2.6e-09 | 5.6e-06 | 26.8 |
| pfu_aug2.0_238.1_27081.t1 | 5 | 5 | Sel1 | 379 | 413 | 9.79508e-43 | 143.6 | 1.2e-10 | 2.5e-07 | 31.1 |
| pfu_aug2.0_238.1_27081.t1 | 4 | 4 | TPR_11 | 401 | 417 | 2.2e-07 | 30.3 | 0.57 | 1200.0 | -0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_238.1_27081.t1 | gi|524896089|ref|XP_005104522.1| | PREDICTED: uncharacterized protein LOC101851286 [Aplysia californica] | 0.0 |
| pfu_aug2.0_238.1_27081.t1 | gi|291235927|ref|XP_002737895.1| | PREDICTED: uncharacterized protein LOC100370268 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_238.1_27081.t1 | gi|390335703|ref|XP_785674.2| | 0.0 | |
| pfu_aug2.0_238.1_27081.t1 | gi|156378243|ref|XP_001631053.1| | predicted protein [Nematostella vectensis] | 3.0e-39 |
| pfu_aug2.0_238.1_27081.t1 | gi|530572782|ref|XP_005280943.1| | PREDICTED: death ligand signal enhancer isoform X2 [Chrysemys picta bellii] | 2.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_238.1_27081.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_238.1_27081.t1 atgtggaggtggctgaacggtctcagaagagctatccgccaccatattcacggtcgtcctgccactgcgtctggagccgt acgtgaagaggaagttgaacatggaattcatcatgatgatgtaaatcatagaactaacgatcagcagcagcagcaagagc atcaaagatataatggtagtgaaggaaatgaaaacaagggcccaaaccatgactggtggaattgcggagctcagtttaac ttttggtctttattccgtcaaaacaatacactagaggccttaggatggggtgcagctgtagtacttggcattcagctgtc caaacatccaaaatgggtttgtcataagaatgaagagtatagagggcagcattgcctgctatacagagtcgctcatgccc tcccgatacatagtcatactggcaaggttgtcatagatggtgataggaaactacatgttgatggtgtcattggggaagag cacattcttgatggtgtaaatgatagttctgacacaaagtcagaaaatacagaaaataaggataatcatgaagatcctgt tggtaaagttttctccgaatttgaagccatgtgtaaaaggtacactgggatagcacgtaacatagaggggaacgatcaag ccaaaagaggtcacatgaccaaagctgccgagagatggtcagtggggagtcaactaggctactcaaaatcgaattttaat cttgggctgtgctatgagactggtcaaggtgtcaaaaaggatcttagtaaggctgcagagcactatcaaatggcaggcga ggatggccacccacaagccctctataacttagctctgatgtatctagaaggtagaggtgttccaaaagatccaagggagg caatccatctacttgagaaggcagctgaatatggcctccggcaggctcagacctacctaggtgtacactatacaacagca gagacgaaagacatggagagagccgttaatttattccaaatggctgccaggcaagatgattcagaagcccagtatttcct ggggatctgttatgagcagggattaggagtagccgttaacgagtgtaaagctgccgatttatattcccagagtgcatctg gtggccatgatggcgcaatgtacaatctcgctgtcttccacgagtatggactaggaggtcttccagaggacagactgaca gctgaagaattgtacaggaagtcagcaagtctaggcaatgagcatgctcaagatcgtctcgaccaatcagatgcaataga agctgtgagtcagtgggaggcgcagcattatcatcgaagacttgatttggattttgtagatatagcatcaccatggtcca gaactcacccatgtaaattccaaggatataaatatccagctcgaagattcaactag |
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Protein
| Protein ID | pfu_aug2.0_238.1_27081.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_238.1_27081.t1 MWRWLNGLRRAIRHHIHGRPATASGAVREEEVEHGIHHDDVNHRTNDQQQQQEHQRYNGSEGNENKGPNHDWWNCGAQFN FWSLFRQNNTLEALGWGAAVVLGIQLSKHPKWVCHKNEEYRGQHCLLYRVAHALPIHSHTGKVVIDGDRKLHVDGVIGEE HILDGVNDSSDTKSENTENKDNHEDPVGKVFSEFEAMCKRYTGIARNIEGNDQAKRGHMTKAAERWSVGSQLGYSKSNFN LGLCYETGQGVKKDLSKAAEHYQMAGEDGHPQALYNLALMYLEGRGVPKDPREAIHLLEKAAEYGLRQAQTYLGVHYTTA ETKDMERAVNLFQMAARQDDSEAQYFLGICYEQGLGVAVNECKAADLYSQSASGGHDGAMYNLAVFHEYGLGGLPEDRLT AEELYRKSASLGNEHAQDRLDQSDAIEAVSQWEAQHYHRRLDLDFVDIASPWSRTHPCKFQGYKYPARRFN |
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