Gene
| Gene Model ID | pfu_aug2.0_238.1_27085 |
|---|---|
| Locus | scaffold238.1 : 133264 ... 150855 : - |
| To GenomeBrowser | scaffold238.1:133264..150855 |
| Genes list of scaffold | scaffold238.1 |
| Synonym | pfu_aug1.0_755.1_07656 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_238.1_27085.t2 | 3 | 1 | HSP70 | 3 | 586 | 0.0 | 561.7 | 0.0 | 0.0 | 540.4 |
| pfu_aug2.0_238.1_27085.t2 | 1 | 1 | MreB_Mbl | 119 | 379 | 1.6e-12 | 46.7 | 3.4e-16 | 2.5e-12 | 46.0 |
| pfu_aug2.0_238.1_27085.t2 | 3 | 2 | HSP70 | 581 | 699 | 0.0 | 561.7 | 2.8e-13 | 2.1e-09 | 35.8 |
| pfu_aug2.0_238.1_27085.t2 | 3 | 3 | HSP70 | 722 | 797 | 0.0 | 561.7 | 0.014 | 110.0 | 0.5 |
Transcript
| Transcript ID | pfu_aug2.0_238.1_27085.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_238.1_27085.t1 atgtcggtggtaggctttgatctcgggagcctcacttgtttcattggagtggcccgagccggtggaatcgaaactatcgc caatgaatacagtgacagatgcactccgtcgtttgtgtcgttgatggagaataatagatgcatgggagtctctgccaaga accagagtgtaacaaacttcaaaaacacattgtcatgttttaaacgattcttaggtcgtcagttcaaagatccttatgtg cagaaggagatgaatgattacaccaaatctttccagattgtcgaaggtccctctggaaatgtcttatttaaggtccatta cttaggagaagaaacagaattttcgccggagcagattactggaatgatgctaaccaagctgagagagacggccgaaaatg ccctgaaaacaaaagtagtggatgtggtggtatctgtaccatcatttttcacggacattgagcggagagccatgcttgat gcttgtcaaataggaggactcaactgcctaaaactcatgaatgatacgactgcagtggctcttgcatatggaatctacaa agaggatctcccggcagaaaatgagaagccacgtaatgtagtatttgtggatgtcgggtattgttcaacacaagtggcag ctgtagctttcaacaaaggaaaactgaaggtacttgcagttgcctcagatctcaacctaggaggacgtgattttgataaa gttcttgttgactattttgcaaacgactttaaaactagatacaaggtagatgctaaaagtaaaatcaaacctcttgtgag gctagctcaggaatgtgaaaagttgaaaaaactgatgagtgctaattcgacaaccattccgctaaatatagaatgtttta tggaggacaaagacgtaacagggaaaatggacagagagaagtttgaggagatgtcagcgggcttattacagcagtttgag gttgtactggccagggttcaagaggaatgtaaacttgcaccaggtgacatatactctgtagaaatgatgggcggatcgtc acgagtaccagctatcaaacagcttgttaataaggtgtttggcaaagagccaagtttcactttgaatgccgacgaagctg tggccagaggatgtgctctacagtgcgctattctatcgccaacattccgtgtacgagatttcaccattctggatgcacag caatatcctattacattgagctgggaaggcgacacagattcccgtagtacatgtagctacattagaaatgtcaaatcttt ggaggtgtttcccaagttccaccagattccgcagtctaagatgttgacgttctataggaaggaggcattccagcttgacg ctaggtactcgataccccctgatgttcctataccagacccatacttaggtacattcaatatcaaatcagtgcaacctcag gcgaacggtgaaagtgcgaaagtgaaagtgaaagtcaggatcaacaaccacggcatattctccgtgttatcagcgtcaat gtcagaggaaatccaaactgaagacgacggaaagggacaagaggcaatggaaaccgaccaggataaaaaggccgacggtc aacaagaacctgtccagaatgacaagggtgaagggacttccgaagagactcccatggaaactgatcaagattctggtgat caacagaaagcagaaaatggcaacaaagataaatctgagaataaagaggagaagagtaaagaagatggtgataagaaaaa gaaagaaacgccaaaaaagaaaacaaagaaaacagatctccccgtagaagaacttgtaccgcagatgtccagaggggatg tcgcaaagttatttgaaaaggagttgaaaatgatcgagcaggataaactggaaaaggacagagcagatgccaagaatgct gtagaggaatatgtatatgacatgagggataaattatacggcacgttagaggacttcattatggaatcagatcgtgaaaa gctgagtaagttgttacaggaaacagaggactggctgtatgaagacggcgacgattgtcagaaaaatgtttatatcgaga aattaaagcagttaaaggctctaggccagccagtagttgacagatatagagaatcccaagagagacctgtagcatttgaa gaattggcaaggtcccttacacatgtccgcaagtttgtagatctgtttgagaaaaaggatgagaaatataatcacattga ccaggctgatgtcgacaaagtcaaaaaatgtctgaaagaaaaatcagaatggtacgagaaacaacttaacaatcagaaca aacagaagaagtatgaaaacccgtctgtgttagcaactcagatcgtagctactagaaaggaattggaatcaacttgcagt cctgtcataaacaaacccaagccaaaagtcgaacctccaaaagaaacaaagaaggaaggaaaagatggcaaaacggaaaa caaagaacaaaagaatgactctacccagcaaaatgctgaaaatacaaacggaaatgcggaaagtggcaaacctgaggaac agtctcaaagtactgaacagaatactgacgtagatatagattga |
|
| Transcript ID | pfu_aug2.0_238.1_27085.t2 |
| Definition | - |
>pfu_aug2.0_238.1_27085.t2 atgtcggtggtaggctttgatctcgggagcctcacttgtttcattggagtggcccgagccggtggaatcgaaactatcgc caatgaatacagtgacagatgcactccgtcgtttgtgtcgttgatggagaataatagatgcatgggagtctctgccaaga accagagtgtaacaaacttcaaaaacacattgtcatgttttaaacgattcttaggtcgtcagttcaaagatccttatgtg cagaaggagatgaatgattacaccaaatctttccagattgtcgaaggtccctctggaaatgtcttatttaaggtccatta cttaggagaagaaacagaattttcgccggagcagattactggaatgatgctaaccaagctgagagagacggccgaaaatg ccctgaaaacaaaagtagtggatgtggtggtatctgtaccatcatttttcacggacattgagcggagagccatgcttgat gcttgtcaaataggaggactcaactgcctaaaactcatgaatgatacgactgcagtggctcttgcatatggaatctacaa agaggatctcccggcagaaaatgagaagccacgtaatgtagtatttgtggatgtcgggtattgttcaacacaagtggcag ctgtagctttcaacaaaggaaaactgaaggtacttgcagttgcctcagatctcaacctaggaggacgtgattttgataaa gttcttgttgactattttgcaaacgactttaaaactagatacaaggtagatgctaaaagtaaaatcaaacctcttgtgag gctagctcaggaatgtgaaaagttgaaaaaactgatgagtgctaattcgacaaccattccgctaaatatagaatgtttta tggaggacaaagacgtaacagggaaaatggacagagagaagtttgaggagatgtcagcgggcttattacagcagtttgag gttgtactggccagggttcaagaggaatgtaaacttgcaccaggtgacatatactctgtagaaatgatgggcggatcgtc acgagtaccagctatcaaacagcttgttaataaggtgtttggcaaagagccaagtttcactttgaatgccgacgaagctg tggccagaggatgtgctctacagtgcgctattctatcgccaacattccgtgtacgagatttcaccattctggatgcacag caatatcctattacattgagctgggaaggcgacacagattcatctttggaggtgtttcccaagttccaccagattccgca gtctaagatgttgacgttctataggaaggaggcattccagcttgacgctaggtactcgataccccctgatgttcctatac cagacccatacttaggtacattcaatatcaaatcagtgcaacctcaggcgaacggtgaaagtgcgaaagtgaaagtgaaa gtcaggatcaacaaccacggcatattctccgtgttatcagcgtcaatgtcagaggaaatccaaactgaagacgacggaaa gggacaagaggcaatggaaaccgaccaggataaaaaggccgacggtcaacaagaacctgtccagaatgacaagggtgaag ggacttccgaagagactcccatggaaactgatcaagattctggtgatcaacagaaagcagaaaatggcaacaaagataaa tctgagaataaagaggagaagagtaaagaagatggtgataagaaaaagaaagaaacgccaaaaaagaaaacaaagaaaac agatctccccgtagaagaacttgtaccgcagatgtccagaggggatgtcgcaaagttatttgaaaaggagttgaaaatga tcgagcaggataaactggaaaaggacagagcagatgccaagaatgctgtagaggaatatgtatatgacatgagggataaa ttatacggcacgttagaggacttcattatggaatcagatcgtgaaaagctgagtaagttgttacaggaaacagaggactg gctgtatgaagacggcgacgattgtcagaaaaatgtttatatcgagaaattaaagcagttaaaggctctaggccagccag tagttgacagatatagagaatcccaagagagacctgtagcatttgaagaattggcaaggtcccttacacatgtccgcaag tttgtagatctgtttgagaaaaaggatgagaaatataatcacattgaccaggctgatgtcgacaaagtcaaaaaatgtct gaaagaaaaatcagaatggtacgagaaacaacttaacaatcagaacaaacagaagaagtatgaaaacccgtctgtgttag caactcagatcgtagctactagaaaggaattggaatcaacttgcagtcctgtcataaacaaacccaagccaaaagtcgaa cctccaaaagaaacaaagaaggaaggaaaagatggcaaaacggaaaacaaagaacaaaagaatgactctacccagcaaaa tgctgaaaatacaaacggaaatgcggaaagtggcaaacctgaggaacagtctcaaagtactgaacagaatactgacgtag atatagattga |
|
Protein
| Protein ID | pfu_aug2.0_238.1_27085.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_238.1_27085.t1 MSVVGFDLGSLTCFIGVARAGGIETIANEYSDRCTPSFVSLMENNRCMGVSAKNQSVTNFKNTLSCFKRFLGRQFKDPYV QKEMNDYTKSFQIVEGPSGNVLFKVHYLGEETEFSPEQITGMMLTKLRETAENALKTKVVDVVVSVPSFFTDIERRAMLD ACQIGGLNCLKLMNDTTAVALAYGIYKEDLPAENEKPRNVVFVDVGYCSTQVAAVAFNKGKLKVLAVASDLNLGGRDFDK VLVDYFANDFKTRYKVDAKSKIKPLVRLAQECEKLKKLMSANSTTIPLNIECFMEDKDVTGKMDREKFEEMSAGLLQQFE VVLARVQEECKLAPGDIYSVEMMGGSSRVPAIKQLVNKVFGKEPSFTLNADEAVARGCALQCAILSPTFRVRDFTILDAQ QYPITLSWEGDTDSRSTCSYIRNVKSLEVFPKFHQIPQSKMLTFYRKEAFQLDARYSIPPDVPIPDPYLGTFNIKSVQPQ ANGESAKVKVKVRINNHGIFSVLSASMSEEIQTEDDGKGQEAMETDQDKKADGQQEPVQNDKGEGTSEETPMETDQDSGD QQKAENGNKDKSENKEEKSKEDGDKKKKETPKKKTKKTDLPVEELVPQMSRGDVAKLFEKELKMIEQDKLEKDRADAKNA VEEYVYDMRDKLYGTLEDFIMESDREKLSKLLQETEDWLYEDGDDCQKNVYIEKLKQLKALGQPVVDRYRESQERPVAFE ELARSLTHVRKFVDLFEKKDEKYNHIDQADVDKVKKCLKEKSEWYEKQLNNQNKQKKYENPSVLATQIVATRKELESTCS PVINKPKPKVEPPKETKKEGKDGKTENKEQKNDSTQQNAENTNGNAESGKPEEQSQSTEQNTDVDID |
|
| Protein ID | pfu_aug2.0_238.1_27085.t2 |
| Definition | - |
>pfu_aug2.0_238.1_27085.t2 MSVVGFDLGSLTCFIGVARAGGIETIANEYSDRCTPSFVSLMENNRCMGVSAKNQSVTNFKNTLSCFKRFLGRQFKDPYV QKEMNDYTKSFQIVEGPSGNVLFKVHYLGEETEFSPEQITGMMLTKLRETAENALKTKVVDVVVSVPSFFTDIERRAMLD ACQIGGLNCLKLMNDTTAVALAYGIYKEDLPAENEKPRNVVFVDVGYCSTQVAAVAFNKGKLKVLAVASDLNLGGRDFDK VLVDYFANDFKTRYKVDAKSKIKPLVRLAQECEKLKKLMSANSTTIPLNIECFMEDKDVTGKMDREKFEEMSAGLLQQFE VVLARVQEECKLAPGDIYSVEMMGGSSRVPAIKQLVNKVFGKEPSFTLNADEAVARGCALQCAILSPTFRVRDFTILDAQ QYPITLSWEGDTDSSLEVFPKFHQIPQSKMLTFYRKEAFQLDARYSIPPDVPIPDPYLGTFNIKSVQPQANGESAKVKVK VRINNHGIFSVLSASMSEEIQTEDDGKGQEAMETDQDKKADGQQEPVQNDKGEGTSEETPMETDQDSGDQQKAENGNKDK SENKEEKSKEDGDKKKKETPKKKTKKTDLPVEELVPQMSRGDVAKLFEKELKMIEQDKLEKDRADAKNAVEEYVYDMRDK LYGTLEDFIMESDREKLSKLLQETEDWLYEDGDDCQKNVYIEKLKQLKALGQPVVDRYRESQERPVAFEELARSLTHVRK FVDLFEKKDEKYNHIDQADVDKVKKCLKEKSEWYEKQLNNQNKQKKYENPSVLATQIVATRKELESTCSPVINKPKPKVE PPKETKKEGKDGKTENKEQKNDSTQQNAENTNGNAESGKPEEQSQSTEQNTDVDID |
|