Gene
Gene Model ID | pfu_aug2.0_238.1_27090 |
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Locus | scaffold238.1 : 251580 ... 252824 : + |
To GenomeBrowser | scaffold238.1:251580..252824 |
Genes list of scaffold | scaffold238.1 |
Synonym | pfu_aug1.0_755.1_07663 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_238.1_27090.t1 | 1 | 1 | FAM181 | 23 | 270 | 2.59941e-42 | 145.9 | 0.0 | 6.00036e-42 | 144.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_238.1_27090.t1 | gi|676434665|ref|XP_009047301.1| | hypothetical protein LOTGIDRAFT_230552 [Lottia gigantea] | 0.0 |
pfu_aug2.0_238.1_27090.t1 | gi|260806799|ref|XP_002598271.1| | hypothetical protein BRAFLDRAFT_69626 [Branchiostoma floridae] | 1.0e-29 |
pfu_aug2.0_238.1_27090.t1 | gi|556996714|ref|XP_006001898.1| | PREDICTED: protein FAM181B [Latimeria chalumnae] | 5.0e-26 |
pfu_aug2.0_238.1_27090.t1 | gi|597749730|ref|XP_007236793.1| | PREDICTED: protein FAM181B [Astyanax mexicanus] | 9.0e-25 |
pfu_aug2.0_238.1_27090.t1 | gi|512824340|ref|XP_004912246.1| | PREDICTED: protein FAM181B [Xenopus (Silurana) tropicalis] | 2.0e-24 |
Transcript
Transcript ID | pfu_aug2.0_238.1_27090.t1 |
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Definition | - |
>pfu_aug2.0_238.1_27090.t1 atgtctggtgcattgaggataccaaattatactgatttcattgcagagacacaacctagaggacaggacgaggcaacaat gaacttgttaagttttgtggatatggcgtccagcaacatcaaactggctctagataaaccttcaaaatcaaaaaggaaag tgaaccatcgtaagtaccttcaaaaacaactcaaaagatgcggaagctcgggtaaagacgatggaagcaggacttacgaa acaagtccgtattcttcaggacaggctaagtatagcagaaaagaaaattctcaaatcggccttcaaatcaagtctttgca agctctgtttgatccaagaaccttgcatgagaaatgttgtgccgatccagcatcaaagggaacttccggttcaagcaagg tgccgttgcgaaagagaaacctacctccgtccttttttattgaacccacgaatttacaaactgaaaacaacactaacttc aacagtgttttgcaaaacaatcttcttccaaatggattattacctcctctagacatgaatatgacgtcacttccgacaga caccttggaatcgattcttggtgtcggtgctcccgacttgcatgatttattatctgtgcagtggaatgacccacatcgtg acaattcaagtactccgagttgtgatgcgagtattggcaattgtagtccaaattcactgtcagattcgtcagagggaatg tgtagtagtgtctcgcctatctcttcggaactgagtccgaatcattctctctggtctccttcatttctcacacaatcgga aacaatcactggacagaattttccagctgaaaataatcattctaatttccagtttccctttccgtccgataatcgaccca atcaatttgtcgaagaaatggacagattccggtttccgcaaaatgcagataatctgaacttgaattcgggtacaacaccg cttcctaccttccctcaagctttttgtggtacttctatggatcttggacagacatcatggacagacacacagattcagcc ttgttatacatatttgtga |
Protein
Protein ID | pfu_aug2.0_238.1_27090.t1 |
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Definition | - |
>pfu_aug2.0_238.1_27090.t1 MSGALRIPNYTDFIAETQPRGQDEATMNLLSFVDMASSNIKLALDKPSKSKRKVNHRKYLQKQLKRCGSSGKDDGSRTYE TSPYSSGQAKYSRKENSQIGLQIKSLQALFDPRTLHEKCCADPASKGTSGSSKVPLRKRNLPPSFFIEPTNLQTENNTNF NSVLQNNLLPNGLLPPLDMNMTSLPTDTLESILGVGAPDLHDLLSVQWNDPHRDNSSTPSCDASIGNCSPNSLSDSSEGM CSSVSPISSELSPNHSLWSPSFLTQSETITGQNFPAENNHSNFQFPFPSDNRPNQFVEEMDRFRFPQNADNLNLNSGTTP LPTFPQAFCGTSMDLGQTSWTDTQIQPCYTYL |