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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_240.1_00477
Locus scaffold240.1 : 39331 ... 46685 : -
To GenomeBrowser scaffold240.1:39331..46685
Genes list of scaffold scaffold240.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_240.1_00477.t1 gi|325297152|ref|NP_001191585.1| pedal peptide-1 precursor [Aplysia californica] 0.0
pfu_aug2.0_240.1_00477.t1 gi|676453812|ref|XP_009053476.1| hypothetical protein LOTGIDRAFT_54854, partial [Lottia gigantea] 2.0e-40
pfu_aug2.0_240.1_00477.t1 gi|524884604|ref|XP_005098921.1| PREDICTED: dentin sialophosphoprotein-like [Aplysia californica] 4.0e-38
pfu_aug2.0_240.1_00477.t1 gi|325296775|ref|NP_001191625.1| pedal peptide 3 precursor [Aplysia californica] 1.0e-33
pfu_aug2.0_240.1_00477.t1 gi|676454122|ref|XP_009053577.1| hypothetical protein LOTGIDRAFT_188423, partial [Lottia gigantea] 4.0e-27

Transcript
Transcript IDpfu_aug2.0_240.1_00477.t1
Definition-
>pfu_aug2.0_240.1_00477.t1
atgaagccttcgtcaagcgcaaagtgtcaagctcccacagtacacaatgacaagaaaagtgataatgacagtacggaaaa
acgccattttgatagcatctcatcaagtaggggtttccgtggatttgcgaagcgtccatatgatagagttggaggacaga
tgggtttctcaggatttaacaagaaagacagtgatggcgacttaaaggaagaaaaacgtttcgacagaatttccggaatg
cgtgggttttcggggtttaacaagaaaagtatggattccattgccggatatagagggatgtcaggtttcaataaaaaggg
aatggattcaattgctggtgggagaggcttttctggattcaacaaaagaggaatggattcaatcgctggattcaggggga
tgtcaggattcaacaaaaagggaatggattcaattgctggtgggagagggttttctggctttaacaaaaaaggaatggat
tcagtcgctggattcaggggaatgtcaggtttcaacaaaaaaggaatggattcaatcgccgggtttagagggatgtcggg
tttcaacaaaaaaggaatggattcaatcgccggtgggaggggattttctggcttcaacaaaaaaggaatggattcaatcg
ctggatttaggggaatgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggtttcaa
caaaaagggtatggattcaatagctggtggaagaggattttctggattcaacaaaaaatccttggattcaatttcgggtg
gaagagggttctctggattcaataagaaatcaatggattcaatttcaggaggaagaggattttctggattcaacaaaaaa
tcaatggattcaatttcgggaggtagagggttttctggattcaacaaaaagtccatggattcaatttcaggaggcagagg
attttctggattcaacaaaaagtga

Protein
Protein IDpfu_aug2.0_240.1_00477.t1
Definition-
>pfu_aug2.0_240.1_00477.t1
MKPSSSAKCQAPTVHNDKKSDNDSTEKRHFDSISSSRGFRGFAKRPYDRVGGQMGFSGFNKKDSDGDLKEEKRFDRISGM
RGFSGFNKKSMDSIAGYRGMSGFNKKGMDSIAGGRGFSGFNKRGMDSIAGFRGMSGFNKKGMDSIAGGRGFSGFNKKGMD
SVAGFRGMSGFNKKGMDSIAGFRGMSGFNKKGMDSIAGGRGFSGFNKKGMDSIAGFRGMXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXGFNKKGMDSIAGGRGFSGFNKKSLDSISGGRGFSGFNKKSMDSISGGRGFSGFNKK
SMDSISGGRGFSGFNKKSMDSISGGRGFSGFNKK

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