Gene
| Gene Model ID | pfu_aug2.0_240.1_00478 |
|---|---|
| Locus | scaffold240.1 : 68576 ... 73533 : + |
| To GenomeBrowser | scaffold240.1:68576..73533 |
| Genes list of scaffold | scaffold240.1 |
| Synonym | pfu_aug1.0_8346.1_09748 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_240.1_00478.t1 | 1 | 1 | Lectin_C | 38 | 135 | 3.4e-08 | 34.0 | 2.9e-12 | 4.4e-08 | 33.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_240.1_00478.t1 | gi|723125526|ref|XP_010295082.1| | PREDICTED: C-type lectin domain family 3 member A [Phaethon lepturus] | 4.0e-10 |
| pfu_aug2.0_240.1_00478.t1 | gi|700414983|ref|XP_009945387.1| | PREDICTED: C-type lectin domain family 3 member A [Leptosomus discolor] | 5.0e-10 |
| pfu_aug2.0_240.1_00478.t1 | gi|675622910|ref|XP_008939601.1| | PREDICTED: C-type lectin domain family 3 member A [Merops nubicus] | 5.0e-10 |
| pfu_aug2.0_240.1_00478.t1 | gi|701402266|ref|XP_009969200.1| | PREDICTED: C-type lectin domain family 3 member A isoform X1 [Tyto alba] | 6.0e-10 |
| pfu_aug2.0_240.1_00478.t1 | gi|701402271|ref|XP_009969201.1| | PREDICTED: C-type lectin domain family 3 member A isoform X2 [Tyto alba] | 7.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_240.1_00478.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_240.1_00478.t1 atgggaaaataatgtccgatcggtacagtgaaactagatgacatttcgaccaatcagagagtctgttactacgccatact gtctcaaaacgatcagcctactactgccaccctgtgtgccaatgaacagacgggtggtacacttgcaatcatacccagtc aacacgcacagaattttatatcttcgggcatacttcccttcactgtaccattttggatcggcgtgaacgacatacaagat gaggggcagtacgtggacgtcaatggtaacgccctggtattcagtaactggaacactgcagcaggggagcctgatgatgg acctggcatgggaccacatgactgcacagcagtgcttactaacaacaactttagatggatgacaagcagatgtcaagtta ctaatcggcgtcaaggattatgttctatcgtcattcctcttccaaatccataa |
|
Protein
| Protein ID | pfu_aug2.0_240.1_00478.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_240.1_00478.t1 MGKXCPIGTVKLDDISTNQRVCYYAILSQNDQPTTATLCANEQTGGTLAIIPSQHAQNFISSGILPFTVPFWIGVNDIQD EGQYVDVNGNALVFSNWNTAAGEPDDGPGMGPHDCTAVLTNNNFRWMTSRCQVTNRRQGLCSIVIPLPNP |
|