Gene
| Gene Model ID | pfu_aug2.0_240.1_00479 |
|---|---|
| Locus | scaffold240.1 : 75097 ... 112575 : - |
| To GenomeBrowser | scaffold240.1:75097..112575 |
| Genes list of scaffold | scaffold240.1 |
| Synonym | pfu_aug1.0_18640.1_40073 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_240.1_00479.t2 | 6 | 1 | DUF4485 | 3 | 64 | 3.1e-19 | 68.4 | 8.5e-23 | 3.1e-19 | 68.4 |
| pfu_aug2.0_240.1_00479.t2 | 6 | 2 | DUF4485 | 222 | 252 | 3.1e-19 | 68.4 | 1.5 | 5500.0 | -2.9 |
| pfu_aug2.0_240.1_00479.t2 | 6 | 3 | DUF4485 | 340 | 363 | 3.1e-19 | 68.4 | 2.1 | 7800.0 | -3.4 |
| pfu_aug2.0_240.1_00479.t2 | 6 | 4 | DUF4485 | 462 | 485 | 3.1e-19 | 68.4 | 2.2 | 8100.0 | -3.4 |
| pfu_aug2.0_240.1_00479.t2 | 6 | 5 | DUF4485 | 844 | 867 | 3.1e-19 | 68.4 | 1.5 | 5400.0 | -2.9 |
| pfu_aug2.0_240.1_00479.t2 | 6 | 6 | DUF4485 | 903 | 922 | 3.1e-19 | 68.4 | 1.8 | 6500.0 | -3.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_240.1_00479.t2 | gi|731502565|ref|XP_010595309.1| | PREDICTED: centrosomal protein of 112 kDa isoform X5 [Loxodonta africana] | 0.0 |
| pfu_aug2.0_240.1_00479.t2 | gi|556965236|ref|XP_005992231.1| | PREDICTED: centrosomal protein of 112 kDa [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_240.1_00479.t2 | gi|156357000|ref|XP_001624013.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_240.1_00479.t2 | gi|558104905|ref|XP_006110633.1| | PREDICTED: centrosomal protein of 112 kDa isoform X1 [Pelodiscus sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_240.1_00479.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_240.1_00479.t1 atgatgtatgacagacagaaatgtgccatatggataaaaaagttatgtgaaccagtaacaggcgtcacaggaaggaagaa caggaatgcttatgcacagctaatgttacacatgttgaagagaggggtgttagagggaccgtttacaacaaagccacagg aaggcacccttcctactttacctccatacatgtctatttactttgatgagccatctggcaaagatgcagaatctgataaa gttcctgactgggtggcaggggagctaaccacctctgtaggatcctcgttattccgatccaccctcggtaatcctgctgc ttcctccacatggaaatctgggatatcaccaatcagacatgagtcgtctccaagaagacgtcctcataccagtttaggaa ttgagttagagagagatcccggtctgtcctcacctacaaggggtctagaacagccagactttggagtaaatgcctatgat gacagcagtgttgactttaggaaacctctcaccaagactgcacacttcagtgaacatctaaacctgatcaaggatgacgg caagaaaaagcacagtgatgatagagatcggaagggtacagatgaagagctaagccaaccctcacccccatacacacagc cctatgctaatacacaaccctatggccacagtactatatttggcagtacggctgcttcatcaacatttttcaatgatcag agcagggactatgataaagatatgaggacaaagatgctggaagccaagtaccatgaagaaaaacttaaactacaacagaa acatgactcagctgtacagaagaaacaggactcagctttacagaaggtgagtaaacaacaacagaaacatgactcggccg tacagagggtgagtaaactacaacagaaacatgactcagccatacaggaggtgagtaaactacaacagaaacatgattca gctgcacagaaggtgagtttagtgcaacagaaacatgactcagctgtagggaagatacttgacagaaagaatgctgagat tgaggaactgaaatccaactacagaagtaaagctaaggaactagaggagacaatcagtaaaatggacagaaaaatacaaa cactggtgaaggattcctcacatgtgagagagacgaaggaaaaacagattgtggagttaaaaaggatggtggaggaatcc acagaagttagaaataatcagtttgagaaaaagggtacagatgaagagctaagccaaccctcacccccatatacacagcc ctatgctaatacacaaccctatggccatagtactatatttggcagtacggctgcttcatcaacatttttcaatgatcaga gcagggactatgataaagatatacttgacagaaagaatgctgagattgaggaactgaaatccaactacagaagtaaggct aaggagctagaggagacaatcagtaaaatggacagaaaaatacaaacactggtgaaggactcctcacatgtgagagagac taaggaaaaacagattgtggagttaaaaaggatggtagaggaatccacagaagttagaaataatcagtttgagaaaaaga tgtatagagtatattgtaaacatttgaatttcagacatagtaatttagagaaggagcatcagagagctgtagagaaacat gatcaggaaactaggatgctgaaaaacaagacagaggccagcctggagttcatgaaacaagaacataatattgctcaagc caaggcagcagacggtatgtcagagttggagcagacgatagattccctgaagcgatccttgaaggatgcagaggatcaaa gacacagacagatgagggagatagagcaaagcaatcaacaagacaaacttcatcaggaaaatttacatgataaacagatg agatcattacgtcaggagatggagcagtccttggaggattcagtcaagaaaatcaagaagttggaagaaactgtcagaga taaagaagatgagatcaaacgtctacaagaccataacaaacaacaaatgttagcttccgagaaagctctggacgagttca aactacaggtggagaaaaatcagaataaaatgtatgacgaaatgaagcatcaggtaagtggagaatataattttgccaat tagactgtagagctaaagatgtccctggaacatgagaaggcccagatgttaaaggacctacacacacagaaggagatgtt gataggggagcatgataaagatctggagaaccttaaggaggtacatcgtaacgagatgtatgaactggagtgtcgcacac aggaaaaacaagacagggacgctaagaaaatatcccagtatgagaggcagatccaggagctgagagaagaggtggtacaa tctaatcagctacgtaaacaacagctggtagaactaggtctgctcagggaggaggaaaaacaaaaaatgttacgggaaca tgagtcagagactataggggaactacaggccacaattaaccatctgagggaggaggtgaaaagggtgaaggagactggag acagaaaagccagtgacattggtcagaaatatgacaatgataaaaagtccatgaaaaaacagtattcatccactgtagag agcttgcagaaagagatagagtctttacagacccattctcgacagttacagagacgtatagagcaaatggaagctgatca tgaagaaaaggtgacacacctgaagttatcatacgaggagagaatgaggggactcatgccaacagctgtcagacaggaac tagaagacacgatagaatccctgaagtcacaagtcaactcactacaacagaaagctctagttctacaggaggaggtggat ttaaaaaacaagtttccgcttggacagtttagttctagttcaccgattaaggcagtatga |
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| Transcript ID | pfu_aug2.0_240.1_00479.t2 |
| Definition | - |
>pfu_aug2.0_240.1_00479.t2 atgatgtatgacagacagaaatgtgccatatggataaaaaagttatgtgaaccagtaacaggcgtcacaggaaggaagaa caggaatgcttatgcacagctaatgttacacatgttgaagagaggggtgttagagggaccgtttacaacaaagccacagg aaggcacccttcctactttacctccatacatgtctatttactttgatgagccatctggcaaagatgcagaatctgataaa gttcctgactgggtggcaggggagctaaccacctctgtaggatcctcgttattccgatccaccctcggtaatcctgctgc ttcctccacatggaaatctgggatatcaccaatcagacatgagtcgtctccaagaagacgtcctcataccagtttaggaa ttgagttagagagagatcccggtctgtcctcacctacaaggggtctagaacagccagactttggagtaaatgcctatggt acagatgaagagctaagccaaccctcacccccatacacacagccctatgctaatacacaaccctatggccacagtactat atttggcagtacggctgcttcatcaacatttttcaatgatcagagcagggactatgataaagatatgaggacaaagatgc tggaagccaagtaccatgaagaaaaacttaaactacaacagaaacatgactcagctgtacagaaggtgagtaaactacaa cagaaacatgactcagcggtacagaaggtgaataaactacaacagaaacaggactcagctttacagaaggtgagtaaaca acaacagaaacatgactcggccgtacagagggtgagtaaactacaacagaaacatgactcagccatacaggaggtgagta aactacaacagaaacatgattcagctgcacagaaggtgagtttagtgcaacagaaacatgactcagctgtagggaagata cttgacagaaagaatgctgagattgaggaactgaaatccaactacagaagtaaagctaaggaactagaggagacaatcag taaaatggacagaaaaatacaaacactggtgaaggattcctcacatgtgagagagacgaaggaaaaacagattgtggagt taaaaaggatggtggaggaatccacagaagttagaaataatcagtttgagaaaaagggtacagatgaagagctaagccaa ccctcacccccatatacacagccctatgctaatacacaaccctatggccatagtactatatttggcagtacggctgcttc atcaacatttttcaatgatcagagcagggactatgataaagatatacttgacagaaagaatgctgagattgaggaactga aatccaactacagaagtaaggctaaggagctagaggagacaatcagtaaaatggacagaaaaatacaaacactggtgaag gactcctcacatgtgagagagactaaggaaaaacagattgtggagttaaaaaggatggtagaggaatccacagaagttag aaataatcagtttgagaaaaagatgtatagagtatattgtaaacatttgaatttcagacatagtaatttagagaaggagc atcagagagctgtagagaaacatgatcaggaaactaggatgctgaaaaacaagacagaggccagcctggagttcatgaaa caagaacataatattgctcaagccaaggcagcagacggtatgtcagagttggagcagacgatagattccctgaagcgatc cttgaaggatgcagaggatcaaagacacagacagatgagggagatagagcaaagcaatcaacaagacaaacttcatcagg aaaatttacatgataaacagatgagatcattacgtcaggagatggagcagtccttggaggattcagtcaagaaaatcaag aagttggaagaaactgtcagagataaagaagatgagatcaaacgtctacaagaccataacaaacaacaaatgttagcttc cgagaaagctctggacgagttcaaactacaggtggagaaaaatcagaataaaatgtatgacgaaatgaagcatcagactg tagagctaaagatgtccctggaacatgagaaggcccagatgttaaaggacctacacacacagaaggagatgttgataggg gagcatgataaagatctggagaaccttaaggaggtacatcgtaacgagatgtatgaactggagtgtcgcacacaggaaaa acaagacagggacgctaagaaaatatcccagtatgagaggcagatccaggagctgagagaagaggtggtacaatctaatc agctacgtaaacaacagctggtagaactaggtctgctcagggaggaggaaaaacaaaaaatgttacgggaacatgagtca gagactataggggaactacaggccacaattaaccatctgagggaggaggtgaaaagggtgaaggagactggagacagaaa agccagtgacattggtcagaaatatgacaatgataaaaagtccatgaaaaaacagtattcatccactgtagagagcttgc agaaagagatagagtctttacagacccattctcgacagttacagagacgtatagagcaaatggaagctgatcatgaagaa aaggtgacacacctgaagttatcatacgaggagagaatgaggggactcatgccaacagctgtcagacaggaactagaaga cacgatagaatccctgaagtcacaagtcaactcactacaacagaaagctctagttctacaggaggaggtggatttaaaaa acaagtttccgcttggacagtttagttctagttcaccgattaaggcagtatga |
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Protein
| Protein ID | pfu_aug2.0_240.1_00479.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_240.1_00479.t1 MMYDRQKCAIWIKKLCEPVTGVTGRKNRNAYAQLMLHMLKRGVLEGPFTTKPQEGTLPTLPPYMSIYFDEPSGKDAESDK VPDWVAGELTTSVGSSLFRSTLGNPAASSTWKSGISPIRHESSPRRRPHTSLGIELERDPGLSSPTRGLEQPDFGVNAYD DSSVDFRKPLTKTAHFSEHLNLIKDDGKKKHSDDRDRKGTDEELSQPSPPYTQPYANTQPYGHSTIFGSTAASSTFFNDQ SRDYDKDMRTKMLEAKYHEEKLKLQQKHDSAVQKKQDSALQKVSKQQQKHDSAVQRVSKLQQKHDSAIQEVSKLQQKHDS AAQKVSLVQQKHDSAVGKILDRKNAEIEELKSNYRSKAKELEETISKMDRKIQTLVKDSSHVRETKEKQIVELKRMVEES TEVRNNQFEKKGTDEELSQPSPPYTQPYANTQPYGHSTIFGSTAASSTFFNDQSRDYDKDILDRKNAEIEELKSNYRSKA KELEETISKMDRKIQTLVKDSSHVRETKEKQIVELKRMVEESTEVRNNQFEKKMYRVYCKHLNFRHSNLEKEHQRAVEKH DQETRMLKNKTEASLEFMKQEHNIAQAKAADGMSELEQTIDSLKRSLKDAEDQRHRQMREIEQSNQQDKLHQENLHDKQM RSLRQEMEQSLEDSVKKIKKLEETVRDKEDEIKRLQDHNKQQMLASEKALDEFKLQVEKNQNKMYDEMKHQVSGEYNFAN XTVELKMSLEHEKAQMLKDLHTQKEMLIGEHDKDLENLKEVHRNEMYELECRTQEKQDRDAKKISQYERQIQELREEVVQ SNQLRKQQLVELGLLREEEKQKMLREHESETIGELQATINHLREEVKRVKETGDRKASDIGQKYDNDKKSMKKQYSSTVE SLQKEIESLQTHSRQLQRRIEQMEADHEEKVTHLKLSYEERMRGLMPTAVRQELEDTIESLKSQVNSLQQKALVLQEEVD LKNKFPLGQFSSSSPIKAV |
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| Protein ID | pfu_aug2.0_240.1_00479.t2 |
| Definition | - |
>pfu_aug2.0_240.1_00479.t2 MMYDRQKCAIWIKKLCEPVTGVTGRKNRNAYAQLMLHMLKRGVLEGPFTTKPQEGTLPTLPPYMSIYFDEPSGKDAESDK VPDWVAGELTTSVGSSLFRSTLGNPAASSTWKSGISPIRHESSPRRRPHTSLGIELERDPGLSSPTRGLEQPDFGVNAYG TDEELSQPSPPYTQPYANTQPYGHSTIFGSTAASSTFFNDQSRDYDKDMRTKMLEAKYHEEKLKLQQKHDSAVQKVSKLQ QKHDSAVQKVNKLQQKQDSALQKVSKQQQKHDSAVQRVSKLQQKHDSAIQEVSKLQQKHDSAAQKVSLVQQKHDSAVGKI LDRKNAEIEELKSNYRSKAKELEETISKMDRKIQTLVKDSSHVRETKEKQIVELKRMVEESTEVRNNQFEKKGTDEELSQ PSPPYTQPYANTQPYGHSTIFGSTAASSTFFNDQSRDYDKDILDRKNAEIEELKSNYRSKAKELEETISKMDRKIQTLVK DSSHVRETKEKQIVELKRMVEESTEVRNNQFEKKMYRVYCKHLNFRHSNLEKEHQRAVEKHDQETRMLKNKTEASLEFMK QEHNIAQAKAADGMSELEQTIDSLKRSLKDAEDQRHRQMREIEQSNQQDKLHQENLHDKQMRSLRQEMEQSLEDSVKKIK KLEETVRDKEDEIKRLQDHNKQQMLASEKALDEFKLQVEKNQNKMYDEMKHQTVELKMSLEHEKAQMLKDLHTQKEMLIG EHDKDLENLKEVHRNEMYELECRTQEKQDRDAKKISQYERQIQELREEVVQSNQLRKQQLVELGLLREEEKQKMLREHES ETIGELQATINHLREEVKRVKETGDRKASDIGQKYDNDKKSMKKQYSSTVESLQKEIESLQTHSRQLQRRIEQMEADHEE KVTHLKLSYEERMRGLMPTAVRQELEDTIESLKSQVNSLQQKALVLQEEVDLKNKFPLGQFSSSSPIKAV |
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