Gene
| Gene Model ID | pfu_aug2.0_240.1_00482 |
|---|---|
| Locus | scaffold240.1 : 159333 ... 171235 : - |
| To GenomeBrowser | scaffold240.1:159333..171235 |
| Genes list of scaffold | scaffold240.1 |
| Synonym | pfu_aug1.0_83919.1_56648 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| crooked neck-like protein 1-like | GO:0005634 GO:0006397 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_240.1_00482.t1 | 9 | 1 | HAT | 14 | 25 | 3.1e-18 | 65.1 | 1.7e-05 | 0.02 | 14.6 |
| pfu_aug2.0_240.1_00482.t1 | 7 | 1 | TPR_14 | 16 | 55 | 5.2e-18 | 63.9 | 0.037 | 42.0 | 5.1 |
| pfu_aug2.0_240.1_00482.t1 | 5 | 1 | Mad3_BUB1_I | 16 | 40 | 1.3e-10 | 41.1 | 0.012 | 14.0 | 5.4 |
| pfu_aug2.0_240.1_00482.t1 | 9 | 2 | HAT | 27 | 57 | 3.1e-18 | 65.1 | 7.4e-10 | 8.4e-07 | 28.6 |
| pfu_aug2.0_240.1_00482.t1 | 6 | 1 | TPR_16 | 29 | 60 | 1.0e-08 | 35.5 | 0.085 | 97.0 | 3.8 |
| pfu_aug2.0_240.1_00482.t1 | 7 | 1 | TPR_19 | 30 | 55 | 2.0e-10 | 40.8 | 0.49 | 560.0 | 0.9 |
| pfu_aug2.0_240.1_00482.t1 | 4 | 1 | Suf | 32 | 110 | 3.4e-06 | 27.0 | 0.00063 | 0.72 | 9.5 |
| pfu_aug2.0_240.1_00482.t1 | 5 | 1 | TPR_17 | 36 | 55 | 5.4e-06 | 26.1 | 0.32 | 370.0 | 1.7 |
| pfu_aug2.0_240.1_00482.t1 | 5 | 2 | Mad3_BUB1_I | 43 | 86 | 1.3e-10 | 41.1 | 2.0e-06 | 0.0023 | 17.7 |
| pfu_aug2.0_240.1_00482.t1 | 9 | 3 | HAT | 59 | 65 | 3.1e-18 | 65.1 | 0.73 | 830.0 | -0.2 |
| pfu_aug2.0_240.1_00482.t1 | 7 | 2 | TPR_19 | 59 | 74 | 2.0e-10 | 40.8 | 5.9 | 6800.0 | -2.5 |
| pfu_aug2.0_240.1_00482.t1 | 5 | 3 | Mad3_BUB1_I | 107 | 227 | 1.3e-10 | 41.1 | 4.1e-06 | 0.0046 | 16.7 |
| pfu_aug2.0_240.1_00482.t1 | 6 | 2 | TPR_16 | 107 | 148 | 1.0e-08 | 35.5 | 0.00092 | 1.0 | 10.0 |
| pfu_aug2.0_240.1_00482.t1 | 5 | 2 | TPR_17 | 108 | 137 | 5.4e-06 | 26.1 | 0.01 | 12.0 | 6.4 |
| pfu_aug2.0_240.1_00482.t1 | 7 | 3 | TPR_19 | 114 | 150 | 2.0e-10 | 40.8 | 0.02 | 23.0 | 5.4 |
| pfu_aug2.0_240.1_00482.t1 | 7 | 2 | TPR_14 | 120 | 162 | 5.2e-18 | 63.9 | 6.1e-05 | 0.07 | 13.8 |
| pfu_aug2.0_240.1_00482.t1 | 4 | 2 | Suf | 124 | 222 | 3.4e-06 | 27.0 | 0.0004 | 0.46 | 10.1 |
| pfu_aug2.0_240.1_00482.t1 | 9 | 4 | HAT | 134 | 144 | 3.1e-18 | 65.1 | 0.75 | 850.0 | -0.2 |
| pfu_aug2.0_240.1_00482.t1 | 5 | 3 | TPR_17 | 142 | 148 | 5.4e-06 | 26.1 | 7.3 | 8300.0 | -2.5 |
| pfu_aug2.0_240.1_00482.t1 | 9 | 5 | HAT | 165 | 173 | 3.1e-18 | 65.1 | 0.1 | 120.0 | 2.6 |
| pfu_aug2.0_240.1_00482.t1 | 7 | 3 | TPR_14 | 168 | 194 | 5.2e-18 | 63.9 | 1.4 | 1600.0 | 0.2 |
| pfu_aug2.0_240.1_00482.t1 | 7 | 4 | TPR_19 | 174 | 237 | 2.0e-10 | 40.8 | 1.5e-05 | 0.017 | 15.4 |
| pfu_aug2.0_240.1_00482.t1 | 5 | 4 | TPR_17 | 188 | 222 | 5.4e-06 | 26.1 | 1.1 | 1300.0 | 0.0 |
| pfu_aug2.0_240.1_00482.t1 | 6 | 3 | TPR_16 | 201 | 232 | 1.0e-08 | 35.5 | 0.013 | 15.0 | 6.4 |
| pfu_aug2.0_240.1_00482.t1 | 9 | 6 | HAT | 202 | 211 | 3.1e-18 | 65.1 | 0.085 | 97.0 | 2.8 |
| pfu_aug2.0_240.1_00482.t1 | 7 | 4 | TPR_14 | 202 | 238 | 5.2e-18 | 63.9 | 5.8e-05 | 0.066 | 13.8 |
| pfu_aug2.0_240.1_00482.t1 | 4 | 3 | Suf | 203 | 286 | 3.4e-06 | 27.0 | 0.014 | 16.0 | 5.0 |
| pfu_aug2.0_240.1_00482.t1 | 6 | 4 | TPR_16 | 207 | 261 | 1.0e-08 | 35.5 | 0.011 | 13.0 | 6.6 |
| pfu_aug2.0_240.1_00482.t1 | 7 | 5 | TPR_14 | 236 | 263 | 5.2e-18 | 63.9 | 0.12 | 130.0 | 3.6 |
| pfu_aug2.0_240.1_00482.t1 | 6 | 5 | TPR_16 | 243 | 295 | 1.0e-08 | 35.5 | 0.0046 | 5.2 | 7.8 |
| pfu_aug2.0_240.1_00482.t1 | 9 | 7 | HAT | 248 | 278 | 3.1e-18 | 65.1 | 5.6e-06 | 0.0063 | 16.2 |
| pfu_aug2.0_240.1_00482.t1 | 5 | 5 | TPR_17 | 256 | 289 | 5.4e-06 | 26.1 | 0.00063 | 0.72 | 10.1 |
| pfu_aug2.0_240.1_00482.t1 | 5 | 4 | Mad3_BUB1_I | 262 | 295 | 1.3e-10 | 41.1 | 0.21 | 240.0 | 1.4 |
| pfu_aug2.0_240.1_00482.t1 | 7 | 6 | TPR_14 | 270 | 295 | 5.2e-18 | 63.9 | 0.00094 | 1.1 | 10.1 |
| pfu_aug2.0_240.1_00482.t1 | 7 | 5 | TPR_19 | 271 | 299 | 2.0e-10 | 40.8 | 0.061 | 69.0 | 3.8 |
| pfu_aug2.0_240.1_00482.t1 | 6 | 6 | TPR_16 | 281 | 333 | 1.0e-08 | 35.5 | 0.0019 | 2.1 | 9.1 |
| pfu_aug2.0_240.1_00482.t1 | 7 | 6 | TPR_19 | 282 | 336 | 2.0e-10 | 40.8 | 0.00019 | 0.22 | 11.8 |
| pfu_aug2.0_240.1_00482.t1 | 9 | 8 | HAT | 284 | 292 | 3.1e-18 | 65.1 | 0.094 | 110.0 | 2.7 |
| pfu_aug2.0_240.1_00482.t1 | 7 | 7 | TPR_14 | 306 | 333 | 5.2e-18 | 63.9 | 0.0015 | 1.7 | 9.5 |
| pfu_aug2.0_240.1_00482.t1 | 5 | 5 | Mad3_BUB1_I | 307 | 365 | 1.3e-10 | 41.1 | 0.015 | 17.0 | 5.2 |
| pfu_aug2.0_240.1_00482.t1 | 4 | 4 | Suf | 309 | 351 | 3.4e-06 | 27.0 | 0.00062 | 0.71 | 9.5 |
| pfu_aug2.0_240.1_00482.t1 | 9 | 9 | HAT | 319 | 348 | 3.1e-18 | 65.1 | 1.3e-05 | 0.015 | 15.0 |
| pfu_aug2.0_240.1_00482.t1 | 7 | 7 | TPR_19 | 364 | 376 | 2.0e-10 | 40.8 | 6.9 | 7900.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_240.1_00482.t1 | gi|676485324|ref|XP_009063622.1| | hypothetical protein LOTGIDRAFT_210722 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_240.1_00482.t1 | gi|524876458|ref|XP_005094945.1| | PREDICTED: crooked neck-like protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_240.1_00482.t1 | gi|557027376|ref|XP_006013776.1| | PREDICTED: crooked neck-like protein 1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_240.1_00482.t1 | gi|390361114|ref|XP_783739.3| | PREDICTED: crooked neck-like protein 1 isoform X1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_240.1_00482.t1 | gi|675615882|ref|XP_008936783.1| | PREDICTED: LOW QUALITY PROTEIN: crooked neck-like protein 1, partial [Merops nubicus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_240.1_00482.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_240.1_00482.t1 atgtttgaggacaacataaggaaaaatagaacagtaatgacaaactggatcaagtatgcacagtgggaggaatctcagaa agaaatactcagagccagatcagtgtttgagagaggcttggatgtggatcacagaaatgttactatatggttaaaatatg ctgaaatggaaatgagagcaagagtgatatataagtatgccttggaccaccttcccaaggattcctgcccagagatttat aaagcttataccatacacgaaaagaagtttggtagtcgggcggccattgaggacgttatagtcagcaaacgtagattcca gtatgaagaggaggtgaagaccaacccattaaactatgatgcttggtttgattacttacgtttgttagagtctgatgggg aagtggagcaagtcagagatacctacgaaagggccatagcaaacatccctccatctaaggagaagcgtcactggcgtcgt tacatttacctgtggattaactatgcactttacgaggaattagaggcggaagatgtagataaaaccagggacgtgtataa agcatgcctcgacattataccacataaaatcttcacatttgcaaagatctggttactttttgctcagtttgaaattaggc agaaaaatttacaaggtgctaggaaggttctgggaacagctgtcggcaaatgtccaaaaaacaaattatacagaggttac atagaactggaactccaactcagagagtttgagagatgtcgtattttatatgaaaaattcctggaatttggatcagaaaa ctgtacaacttggatgaagtacgctgagttagagacaattctaggtgatattgaccgagcagaggccatatatgagctcg ccatcaaccagcctaagctagacatgccagaagtcctgtggaaagcatacatagacttccaaatagaacaagaagaatat gataaaacacgagcattgtacaggaggctactggaacgcacacaccatgtcaaggtttggatcagttttgctcattttga gaagtctatagagacagaggaccggttagagaatacaaggaaggtgtacagtgacgctaacaaagcactgaagaaagctg gagaaaaggaggagagacttatgttgttagaatcatggcaggagtttgagtcagcaacagattga |
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Protein
| Protein ID | pfu_aug2.0_240.1_00482.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_240.1_00482.t1 MFEDNIRKNRTVMTNWIKYAQWEESQKEILRARSVFERGLDVDHRNVTIWLKYAEMEMRARVIYKYALDHLPKDSCPEIY KAYTIHEKKFGSRAAIEDVIVSKRRFQYEEEVKTNPLNYDAWFDYLRLLESDGEVEQVRDTYERAIANIPPSKEKRHWRR YIYLWINYALYEELEAEDVDKTRDVYKACLDIIPHKIFTFAKIWLLFAQFEIRQKNLQGARKVLGTAVGKCPKNKLYRGY IELELQLREFERCRILYEKFLEFGSENCTTWMKYAELETILGDIDRAEAIYELAINQPKLDMPEVLWKAYIDFQIEQEEY DKTRALYRRLLERTHHVKVWISFAHFEKSIETEDRLENTRKVYSDANKALKKAGEKEERLMLLESWQEFESATD |
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